Gene detail information of Glyur000080s00008707 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54070.1 | 1.00E-29 | heat shock transcription factor A9 |
| NR | XP_007154636.1 | 3.16E-108 | hypothetical protein PHAVU_003G135200g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LVW2|HSFA9_ARATH | 6.00E-34 | Heat stress transcription factor A-9 |
| trEMBL | tr|V7CBJ1|V7CBJ1_PHAVU | 1.00E-108 | Uncharacterized protein {ECO:0000313|EMBL:ESW26630.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00080 | 312125 | 313065 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.071 |
| SRR1783600 | control | 2.055 |
| SRR1783602 | moderate drought stress | 5.070 |
| SRR1811619 | moderate drought stress | 5.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.649 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.679 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.024 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.091 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.193 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.747 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.835 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.327 |
| SRR2868004 | Drought Stress (root) | 5.631 |
| SRR2967015 | Control (root) | 7.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.166 |
| SRR9715740 | Leaf | 2.953 |
| SRR9715741 | Leaf | 1.763 |
| SRR9715739 | Root | 2.588 |
| SRR9715742 | Root | 5.911 |
| SRR9715743 | Root | 5.983 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.458 |
| SRR8749028 | MeJA induced 9h | 6.496 |
| SRR8749029 | MeJA induced 9h | 0.838 |
| SRR8749030 | Uninduced | 1.321 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.366 |
| SRR8400027 | Control - Root | 5.187 |