Gene detail information of Glyur000080s00008705 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33050.3 | 8.00E-134 | calmodulin-binding family protein |
| NR | KHN17680.1 | 0 | hypothetical protein glysoja_005877 [Glycine soja] |
| COG | YP_006808982.1 | 4.00E-13 | hypothetical protein O3I_020245 [Nocardia brasiliensis ATCC 700358] |
| trEMBL | tr|I1MSF5|I1MSF5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G06150.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00080 | 297101 | 300464 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.701 |
| SRR1783600 | control | 3.399 |
| SRR1783602 | moderate drought stress | 2.580 |
| SRR1811619 | moderate drought stress | 1.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.017 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.729 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.951 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.606 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.849 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.179 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.092 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.584 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.339 |
| SRR2868004 | Drought Stress (root) | 57.806 |
| SRR2967015 | Control (root) | 80.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 118.140 |
| SRR9715740 | Leaf | 50.441 |
| SRR9715741 | Leaf | 117.347 |
| SRR9715739 | Root | 102.511 |
| SRR9715742 | Root | 226.247 |
| SRR9715743 | Root | 198.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 226.018 |
| SRR8749028 | MeJA induced 9h | 252.781 |
| SRR8749029 | MeJA induced 9h | 267.105 |
| SRR8749030 | Uninduced | 928.046 |
| SRR8749031 | Uninduced | 355.826 |
| SRR8749032 | Uninduced | 376.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.077 |
| SRR8400027 | Control - Root | 45.004 |