Gene detail

Gene detail information of Glyur000080s00008693

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G57040.1	6.00E-72	Lactoylglutathione lyase / glyoxalase I family protein
NR	XP_007154625.1	2.74E-134	hypothetical protein PHAVU_003G134400g [Phaseolus vulgaris]
COG	YP_008546528.1	3.00E-38	lactoylglutathione lyase-like lyase [Sulfuricella denitrificans skB26]
trEMBL	tr\|V7C8Z8\|V7C8Z8_PHAVU	1.00E-134	Uncharacterized protein {ECO:0000313\|EMBL:ESW26619.1}

Sequence

Transcript Sequence

>Glyur000080s00008693.1
TGATTTTATAACAGTGCCTGCCTCATGCCCAAACCCAAATGAGTGGCTGCTGTTTAGTGTTAACCCTGAAATTTTGTGAGCCCCAGAANCCGGGATGGTTCTGGTGTCCACTCGTTGCTCAATACTCATACTGAGCTTACGGATTAGGACTGATTCACAATGTATATGGCAAACTAGAAGGACGAAACCCAGATGAGTTGTTGCTGTGCCATGGCCTCCCTTCTCAAAGCATCTTCCTTTATCTCTCCTCTTCACCAAAAGTTGAATCATGTCAGCTTTTCGCCCATTACCACGAATGTGCAATCCAAATTTCACCATGCTAGTGTAAGAAATGGGAGATGGCATGTTCCCAGCATGACAATAAAAGCTCAGATGGCTGTTGAAGGGGATGTGATTGACAAAGAACCAGCCTCTGCCAATGAAGAAAGCGATTACGGTGTTGTTAGTGTTCACCATGTTGGAATTCTATGTGAAAACCTGGAGAGATCACTTGACTTCTATCAAAACATTTTAGGCCTCAAGATAAATGAAGCAAGGCCACATGATAAGCTCCCATACAGGGGTGCTTGGTTGTGGGTAGGGTCTGAGATGATTCACTTGATGGAGCTTCCAAATCCTGACCCTCTAACTGGACGAGCTGAACATGGGGGTCGAGATCGTCACACGTGTATTGCAATCCGAGATGTTTCNAAGCTGAAAGCAATCCTTGATAAAGCTGGTATCCCTTACACACTTAGCCGATCTGGAAGACCAGCAATCTTTACACGTGATCCAGATGCAAATGCTCTAGAGTTTACACAAATAGATGACTGAGATGTTTCTGGATATTACTTGCAAGGTGGAAATAAATGTACAGATGAGTGCATTTATGTAAAGGCCAAAGGGGTTGTATGTAACTAGTATAAGCCGTAGCAAAGTAGCCTGCTATGCAGTGGCATTACTAGCAGCAGCAGAGTATTGACTCATCCAAGTTTATTTTCCAATATAGAAACCAATATAGAATATGCTATTGGCTTATAGTAGATCTGTAGGGATAAATGAAACATGGATA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00080	232324	234267	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000080s00008693.1	PF12681.2	Glyoxalase_2	92	201	2.00E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	28.296
SRR1783600	control	28.624
SRR1783602	moderate drought stress	46.518
SRR1811619	moderate drought stress	46.219

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	41.048
DRR006520	Root Summer glycyrrhizin high producing strain	40.236
DRR006521	Root Winter glycyrrhizin high producing strain	13.297
DRR006522	Root Winter glycyrrhizin high producing strain	12.911
DRR006523	Root Summer glycyrrhizin low producing strain	33.797
DRR006524	Root Summer glycyrrhizin low producing strain	34.203
DRR006525	Leaf Summer glycyrrhizin high producing strain	398.377
DRR006526	Leaf Summer glycyrrhizin high producing strain	394.432

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.058
SRR2868004	Drought Stress (root)	28.714
SRR2967015	Control (root)	18.690

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	372.462
SRR9715740	Leaf	501.961
SRR9715741	Leaf	373.637
SRR9715739	Root	7.348
SRR9715742	Root	12.574
SRR9715743	Root	14.147

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	17.232
SRR8749028	MeJA induced 9h	11.324
SRR8749029	MeJA induced 9h	11.860
SRR8749030	Uninduced	1.946
SRR8749031	Uninduced	0.073
SRR8749032	Uninduced	2.002

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	35.758
SRR8400027	Control - Root	34.028