Gene detail information of Glyur000080s00008686 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G26060.1 | 9.00E-32 | Ribosomal protein L18ae family |
| NR | AFK41132.1 | 7.52E-79 | unknown [Medicago truncatula] |
| trEMBL | tr|I3SLJ0|I3SLJ0_MEDTR | 3.00E-79 | Uncharacterized protein {ECO:0000313|EMBL:AFK41132.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00080 | 190049 | 193616 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.315 |
| SRR1783600 | control | 5.307 |
| SRR1783602 | moderate drought stress | 5.770 |
| SRR1811619 | moderate drought stress | 5.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.104 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.254 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.669 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.176 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.075 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.227 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.275 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.060 |
| SRR2868004 | Drought Stress (root) | 33.756 |
| SRR2967015 | Control (root) | 24.812 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.043 |
| SRR9715740 | Leaf | 12.457 |
| SRR9715741 | Leaf | 28.178 |
| SRR9715739 | Root | 5.209 |
| SRR9715742 | Root | 6.656 |
| SRR9715743 | Root | 7.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.539 |
| SRR8749028 | MeJA induced 9h | 41.250 |
| SRR8749029 | MeJA induced 9h | 38.161 |
| SRR8749030 | Uninduced | 40.377 |
| SRR8749031 | Uninduced | 35.760 |
| SRR8749032 | Uninduced | 36.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.503 |
| SRR8400027 | Control - Root | 13.259 |