Gene detail

Gene detail information of Glyur000080s00008680

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G20490.1	0	Myosin family protein with Dil domain
NR	XP_004507972.1	0	PREDICTED: unconventional myosin-Va-like [Cicer arietinum]
COG	YP_004652058.1	3.00E-06	hypothetical protein PUV_12540 [Parachlamydia acanthamoebae UV-7]
Swissprot	tr\|F4K5J1\|MYO17_ARATH	0	Myosin-17
trEMBL	tr\|A0A072US24\|A0A072US24_MEDTR	0	DIL domain myosin family protein {ECO:0000313\|EMBL:KEH32467.1}

Sequence

Transcript Sequence

>Glyur000080s00008680.1
TTGCAGTCTGCACCAGTGAACATTATTGTCGGTTCTCATGTCTGGGTTGAAGATCCAAAACAAGCATGGATTGGTGGAGAAGTTACTAAAGTCAACGGTGAAGAAGTCCATGTTTGTACAGCAGATGGGAAAACAGTTGTCAAAAATATCTCAAAGGTTTTCCCCAAGGATAATGAAGCCTCGCCTGGAGGTGTAGATGACATGACAAAATTGTCATACTTGCATGAACCAGGAGTTTTGCACAACTTGGCAGCTAGATATGAACTTAATGAAATCTATACGTATACTGGAAATATTCTGATTGCAATAAACCCATTTCAAAGGCTACCGCATCTATATGATACTCACATGATGGAACAATACAAAGGAGCTGCATTTGGAGAGTTGAGTCCCCATGTTTTTGCAGTTGCNGATGTTGCGTACAGGGCAATGATCAATGAGGGAAAAAGCAACTCAATCCTGGTTAGCGGTGAGAGTGGGGCTGGTAAGACAGAGACAACAAAAATGCTTATGCGATATCTTGCATACCTTGGGGGCCGATCTGGAGTAGAAGGGCGGACNGTTGAACAACAAGTTTTAGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCCAAAACAGTGAGAAACAATAATTCAAGTCGTTTTGGTAAATTTGTTGAGATACAATTCGACAACAAGGGAAGGATCTCCGGGGCAGCTATACGGACTTATCTGCTTGAGAGGTCCCGTGTTTGTCAAATTTCAGATCCTGAAAGAAATTACCACTGCTTTTACCTTCTTTGTGCAGCACCAGCTGAGGAAAAAGAGAAGTATAAACTGGGAAGTCCTAGCTCCTTCCATTACCTAAACCAATCCAACTGCTATGTGCTGGATGGAGTGGATGATGCAGAAGAATATCTTGCAACTCGTAGGGCAATGGATATTGTTGGAATCAGTGAGGAGGAGCAGGAGGCAATTTTTAGGGTCATTGCAGCAATTTTGCATCTTGGAAATGTTGAATTTGCAAAAGGAGAGGAGATTGACTCTTCCGTCCTCAAAGACGAGAAGTCTAGGTTCCATCTTAATGTGACTGCTGAACTTCTTAGGTGTGATGGTAAGAGCTTGGAAGATGCACTGATCCAGCGTGTGATGGTAACGCCTGAGGAAATTATAACAAGAACCCTTGATCCTGTAGCAGCTATTGGTAGCAGGGATGCATTAGCTAAAACTATTTATTCTCGTTTGTTTGACTGGCTCGTGGAGAAGATTAATATTTCAATTGGGCAAGATCAAAATTCAAAATCTATCATCGGAGTTCTTGATATCTATGGGTTTGAAAGTTTTAAGTTCAACAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGCTACAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAGATCAACTGGAGTTACATAGAGTTTGTTGACAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCAGGAGGAATAATTTCACTTCTTGATGAAGCCTGTATGTTTCCTAAGTCTACACATGAAACGTTTTCTCAGAAGTTGTACCAGACATTCAAAAACAACAAGCGCTTTATCAAACCTAAACTTTCTCGGACTAGTTTTACAATATCTCATTATGCAGGGGAGGTGACATATCAGGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTAGCAGAACATCAGGATCTGCTGATAGCCTCAAAATGCTCATTTGTGGCAGGTCTATTCCCCCCTTCTCCAGAGGAGTCTTCAAAATCATCAAAGTTCTCTTCAATAGGATCTCGTTTTAAGTTACAACTTCAATCTTTGATGGAGACGCTAAGTTCAACAGAACCTCACTATATTAGATGTGTGAAGCCAAATAATGTTCTCAAGCCTGCTATTTTGGAAAATCTCAATATTATCCAGCAATTACGCTGTGGTGTGNGTATATCATACTTTTTCTATGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACGAGACGGACCTTTTATGAATTTCTTAACCGATTTGGTGTTCTTGCCCCTGAGGTTCTGGATGGAAACTATGATGACAAGGTTGCATGCCAAATGATCCTGGATAAAATGGATATGAAAGGCTATCAGATAGGCAAGACAAAGGTTTTCCTAAGAGCAGGCCAGATGGCTGAGTTGGATGCAAGAAGAGCTGAGGTTCTTGGAAATGCAGCTAGAATCATCCAGAGGCAAACACGTGCCCATATTGCACGCAAGGAATTCATTGCATTGCGTCAAGCTGCAATTTGTTTGCAATCTAATTTGCGAGGAATATTGGCTCGGAAGCTCTATGAGCAGTTGCGGCGTGAAGCAGCAGCTGTGAAAATAGAAAAGAACTTCAAAGGATACATTGCCAGGAAGTCTTACTTAAAAGCACAATCATCAGCAATCATATTACAGACAGGTTTAAGGGCTATGAAGGCTCGTGATGAATTTAGATTTAGAAAGCAAACAAAGGCTGCAATTCACATCCAGGCTCATTTGCGTCGGCACATTGCATATTCATATTATAAAAGATTGCAAAAGGCTGCAGTTGTTACTCAATGTGGTTGGAGGAGAAGGGTTGCTAGAAGGGAACTTAGAATGCTTAAAATGGCTGCAAGAGAAACAGGGGCTCTTAAAGAAGCAAAAGACAAACTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAGGAAAAGGCACAAGATATTGCTAAGTTACAGGATGCTTTACATGCAATGCAAATACAAGTTGAAGAAGCAAATGCCAGGGTCATCAAAGAGCGTGAGGCGGCACAGAAAGCCATTGAAGAAGCACCCCCAGTTATTAAAGAGACTCCTGTTATAATTCAAGATACTGAAAAGATTAATTCTCTATTGGCTGAAGTCAATAGTTTGAAGGAATCACTGCTATTGGAAAGAGAAGCTAAAGTAGAGGCCAGAAAAGCTCAGGCTGAGGCTGAAGCTAGAAATAAGGAGCTGGTTAAAAAAGTTGAGGATTCTGACCGCAAAGTGGATCAACTCCAAGAATTGGTTCAGAGATTGGAGGAAAAAATTTCCAATTCAGAGTCAGAAAATCAAGTTCTTCGTCAGCAAGCACTGGCTGTATCACCTACTGGAAAAGCTCTATCTGCAAGACCAAGGACAGTGATTATTCAGAGGACACCTGAAAATGGGAATGCTCTAAATGGTGAAGCAAAAATTGGAACAGATATGACTCTTGCTGTNTCCAATGTACGTGAGCCTGAATCTGAAGGAAAACCACAAAAGTCTCTCAATGAGAAGCAGCAAGAAAACCAGGACTTGTTGATCAAGTGCATATCACAAGATTTGGGATTTTCTGGGGGAAAACCTGTCGCTGCATGTGTCATATATAAATGTCTTCTACACTGGAGGTCATTTGAAGTTGAAAGAACAAGTGTCTTTGACCGTATCATTCAAACAATAGCTTCAGCTGTTGAGGCCCAGGATAACACTGATGTATTAGCCTATTGGTTGTCTAATACATCTACTTTGTTGTTGCTACTCCAACGCACTCTCAAAGCAAGTGGAGCTGCTAGCTTAACACCACAGCGGCGGAGAACAGCATCATCTTCTCTGTTTGGAAGAATGTCTCAAGGGCTAAGGGCATCTCCTCAAAGTGCTGGATTACCATTTATAAATGGTCGGGGTCTTAGTAGACTTGAGGATTTACGACAAGTAGAAGCAAAATATCCGGCACTCCTGTTCAAGCAACAGCTTACTGCCTTCCTTGAAAAAATATATGGAATGATACGGGATAACCTAAAAAAGGAGATATCCCCTTTACTTGGACTGTGTATACAGGCTCCAAGGACCTCGCGTCAAGGTTTAGTAAAGGGTCGCTCACATGCTAATGCGGTTGCTCAGCAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAAAAGCTTAAACAATTCTCTAAAGATAATGAAAGCAAACTATGCGCCTCCTTTCTTGGTCCGCAAAGTGTTCACTCAAATATTCTCGTTCATCAATGTTCAATTATTCAACAGTCTTCTGTTGCGTCGTGAGTGTTGTTCGTTCAGCAACGGGGAGTATGTGAAGACAGGTTTGGCTGAATTAGAACAGTGGTGCGTCGAGGCAACAGAGGAGTATACTGGCACAGCTTGGGATGAACTGAGACATATCAGGCAAGCTGTTGGGTTCCTGGTAAGAGTGATACATCAAAAACCCAAAAAGTCCCTGAATGAAATAACTAAGGAGCTTTGCCCTGTTCTCAGTATACAACAGTTATACAGGATAAGTACAATGTACTGGGATGACAAATATGGCACTCACAGTGTGTNTACGGACGTTATAACAAGCATGAGAGCCATGATGTCTGAGGACTCTAATAATGCTGTCAGCACTTCTTTCCTATTAGATGATGACTCGAGCATTCCATTTTCGGTGGATGACATCTCCAAATCAATGCAACAAGTAGAAGTAGCTGACGTGGATCCTCCTCCGTTGATACGTGAGAACTCAGGGTTCGGGTTCTTACTAGCTCGCTCAGAGTGATGCAAAACAATCGGTGATTATTACCTCTCTCTGATGCTTCACCTTGTGGCTATCTATCTCCGGGGCACTGCACAAAGATGCAGGTGCCAAGATGTGCATATAATTTCATTGTCATCATGTGTATAGTATATTTTCGCCAACTCAGGCTTCTAATATTGGTGTGATGCCTGGGTCAATTCATTTTTACCCTTCAAGTTTCATCAACACGANGGGTTTTGTTAAGAAGCCATGTCACAAGGTCACGTGACAAATGGCGATCATAGGTACAGGCTGGTGTCCAGGCACTGCTGTCACACCTGCCCAAGGTTCTTTTTTTTTTGTTTTTTTTTCTTCTTCATATTGTTGGTTTTCAAGTGTTATACGTGGGTGCATTTAGTGACTCCATGTATTTTATTGGGCTCATTTAGTGACTCCATGTATTTTATTGGGCTCATTTNCATTTAGTGACTCCATGTATTTTATTGGGCTCATTTAGTGACTCCATGTATTTTATTGGGCTCATTTGTTTCTTTTGGTTGCTATTTGTATTTACTTGTGCAATTTTTTTGGGTCAGATTTAAACTTAAGATAGTGTTTTTTGAACAGCTGAGTTATAATCTGATGAC

Protein Sequence

>Glyur000080s00008680.1
LQSAPVNIIVGSHVWVEDPKQAWIGGEVTKVNGEEVHVCTADGKTVVKNISKVFPKDNEASPGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEEKEKYKLGSPSSFHYLNQSNCYVLDGVDDAEEYLATRRAMDIVGISEEEQEAIFRVIAAILHLGNVEFAKGEEIDSSVLKDEKSRFHLNVTAELLRCDGKSLEDALIQRVMVTPEEIITRTLDPVAAIGSRDALAKTIYSRLFDWLVEKINISIGQDQNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFSQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYQADMFLDKNKDYVVAEHQDLLIASKCSFVAGLFPPSPEESSKSSKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAILENLNIIQQLRCGVXISYFFYGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNYDDKVACQMILDKMDMKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQTRAHIARKEFIALRQAAICLQSNLRGILARKLYEQLRREAAAVKIEKNFKGYIARKSYLKAQSSAIILQTGLRAMKARDEFRFRKQTKAAIHIQAHLRRHIAYSYYKRLQKAAVVTQCGWRRRVARRELRMLKMAARETGALKEAKDKLEKRVEELTWRLQIEKRLRTDLEEEKAQDIAKLQDALHAMQIQVEEANARVIKEREAAQKAIEEAPPVIKETPVIIQDTEKINSLLAEVNSLKESLLLEREAKVEARKAQAEAEARNKELVKKVEDSDRKVDQLQELVQRLEEKISNSESENQVLRQQALAVSPTGKALSARPRTVIIQRTPENGNALNGEAKIGTDMTLAVSNVREPESEGKPQKSLNEKQQENQDLLIKCISQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSVFDRIIQTIASAVEAQDNTDVLAYWLSNTSTLLLLLQRTLKASGAASLTPQRRRTASSSLFGRMSQGLRASPQSAGLPFINGRGLSRLEDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRQGLVKGRSHANAVAQQALIAHWQSIVKSLNNSLKIMKANYAPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCVEATEEYTGTAWDELRHIRQAVGFLVRVIHQKPKKSLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVXTDVITSMRAMMSEDSNNAVSTSFLLDDDSSIPFSVDDISKSMQQVEVADVDPPPLIRENSGFGFLLARSE

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00080	160316	173320	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016459 myosin complex

molecular_function

GO:0003774 motor activity

GO:0005515 protein binding

GO:0005524 ATP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000080s00008680.1	PF02736.14	Myosin_N	12	47	2.60E-10
Glyur000080s00008680.1	PF00063.16	Myosin_head	65	729	1.50E-237
Glyur000080s00008680.1	PF00612.22	IQ	747	764	0.023
Glyur000080s00008680.1	PF00612.22	IQ	768	787	0.0042
Glyur000080s00008680.1	PF00612.22	IQ	817	836	0.14
Glyur000080s00008680.1	PF00612.22	IQ	841	861	0.02
Glyur000080s00008680.1	PF00612.22	IQ	865	884	0.019
Glyur000080s00008680.1	PF01843.14	DIL	1357	1465	5.40E-34

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.746
SRR1783600	control	15.779
SRR1783602	moderate drought stress	16.213
SRR1811619	moderate drought stress	16.187

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	16.309
DRR006520	Root Summer glycyrrhizin high producing strain	16.087
DRR006521	Root Winter glycyrrhizin high producing strain	17.889
DRR006522	Root Winter glycyrrhizin high producing strain	17.549
DRR006523	Root Summer glycyrrhizin low producing strain	16.969
DRR006524	Root Summer glycyrrhizin low producing strain	17.063
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.902
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.639

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	47.432
SRR2868004	Drought Stress (root)	56.079
SRR2967015	Control (root)	57.690

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	28.750
SRR9715740	Leaf	24.973
SRR9715741	Leaf	37.895
SRR9715739	Root	4.308
SRR9715742	Root	24.025
SRR9715743	Root	22.434

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.136
SRR8749028	MeJA induced 9h	27.604
SRR8749029	MeJA induced 9h	9.963
SRR8749030	Uninduced	19.105
SRR8749031	Uninduced	25.765
SRR8749032	Uninduced	14.004

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	44.632
SRR8400027	Control - Root	44.155