Gene detail information of Glyur000080s00008673 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G60170.1 | 7.00E-07 | pre-mRNA processing ribonucleoprotein binding region-containing protein |
| NR | XP_004491743.1 | 3.60E-23 | PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|I3SIU7|I3SIU7_LOTJA | 2.00E-23 | Uncharacterized protein {ECO:0000313|EMBL:AFK40189.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00080 | 113740 | 116068 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.210 |
| SRR1783600 | control | 1.886 |
| SRR1783602 | moderate drought stress | 2.071 |
| SRR1811619 | moderate drought stress | 1.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.237 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.354 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.977 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.674 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.088 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.354 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.039 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.857 |
| SRR2868004 | Drought Stress (root) | 5.295 |
| SRR2967015 | Control (root) | 5.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.202 |
| SRR9715740 | Leaf | 0.215 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.473 |
| SRR9715742 | Root | 0.584 |
| SRR9715743 | Root | 0.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.569 |
| SRR8749028 | MeJA induced 9h | 5.464 |
| SRR8749029 | MeJA induced 9h | 6.442 |
| SRR8749030 | Uninduced | 1.705 |
| SRR8749031 | Uninduced | 2.839 |
| SRR8749032 | Uninduced | 2.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.508 |
| SRR8400027 | Control - Root | 0.818 |