Gene detail information of Glyur000080s00008672 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13980.1 | 2.00E-23 | |
| NR | XP_003550621.1 | 4.08E-144 | PREDICTED: micronuclear linker histone polyprotein-like [Glycine max] |
| trEMBL | tr|I1MSC7|I1MSC7_SOYBN | 2.00E-144 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G05890.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00080 | 109659 | 110843 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.761 |
| SRR1783600 | control | 4.683 |
| SRR1783602 | moderate drought stress | 1.148 |
| SRR1811619 | moderate drought stress | 1.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.418 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.079 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.164 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.252 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.547 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.892 |
| SRR2868004 | Drought Stress (root) | 5.323 |
| SRR2967015 | Control (root) | 8.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.454 |
| SRR9715740 | Leaf | 0.053 |
| SRR9715741 | Leaf | 0.058 |
| SRR9715739 | Root | 1.723 |
| SRR9715742 | Root | 5.194 |
| SRR9715743 | Root | 4.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.448 |
| SRR8749028 | MeJA induced 9h | 2.155 |
| SRR8749029 | MeJA induced 9h | 3.573 |
| SRR8749030 | Uninduced | 0.355 |
| SRR8749031 | Uninduced | 0.050 |
| SRR8749032 | Uninduced | 0.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.297 |
| SRR8400027 | Control - Root | 9.181 |