Gene detail information of Glyur000080s00008665 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31670.1 | 6.00E-65 | Stress responsive alpha-beta barrel domain protein |
| NR | XP_004507984.1 | 5.04E-142 | PREDICTED: uncharacterized protein LOC101506894 isoform X1 [Cicer arietinum] |
| trEMBL | tr|C6T5C9|C6T5C9_SOYBN | 1.00E-116 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G05840.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00080 | 74784 | 78155 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000080s00008665.1 | PF07876.7 | Dabb | 5 | 106 | 1.30E-15 |
| Glyur000080s00008665.1 | PF07876.7 | Dabb | 121 | 214 | 6.90E-07 |
| Glyur000080s00008665.1 | PF07876.7 | Dabb | 273 | 368 | 1.20E-20 |
| Glyur000080s00008665.1 | PF07876.7 | Dabb | 385 | 476 | 4.00E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 78.277 |
| SRR1783600 | control | 79.021 |
| SRR1783602 | moderate drought stress | 56.388 |
| SRR1811619 | moderate drought stress | 56.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 47.114 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.701 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.036 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.279 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.020 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.034 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 78.991 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 78.721 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.796 |
| SRR2868004 | Drought Stress (root) | 29.206 |
| SRR2967015 | Control (root) | 31.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 115.980 |
| SRR9715740 | Leaf | 97.124 |
| SRR9715741 | Leaf | 84.311 |
| SRR9715739 | Root | 76.633 |
| SRR9715742 | Root | 46.519 |
| SRR9715743 | Root | 44.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.367 |
| SRR8749028 | MeJA induced 9h | 17.791 |
| SRR8749029 | MeJA induced 9h | 19.253 |
| SRR8749030 | Uninduced | 9.627 |
| SRR8749031 | Uninduced | 2.794 |
| SRR8749032 | Uninduced | 6.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.368 |
| SRR8400027 | Control - Root | 38.812 |