Gene detail

Gene detail information of Glyur000079s00008953

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G75220.1	5.00E-180	Major facilitator superfamily protein
NR	XP_004512048.1	0	PREDICTED: sugar transporter ERD6-like 6-like isoform X2 [Cicer arietinum]
COG	YP_006544343.1	7.00E-76	D-xylose-proton symporter [Methanoculleus bourgensis MS2]
Swissprot	tr\|Q9FRL3\|ERDL6_ARATH	0	Sugar transporter ERD6-like 6
trEMBL	tr\|G7KDL5\|G7KDL5_MEDTR	0	Sugar porter (SP) family MFS transporter {ECO:0000313\|EMBL:AES94966.2}

Sequence

Transcript Sequence

>Glyur000079s00008953.1
ATGAGCTTCAGGGACGATTGCGAGGATGGGAAAGAGCTTGGGAAGCCCTTCATCTACACTGGAAGCTGGTACAGAATGGGTTCGAGACAGTTCAGTACCATCTTGGGCTCCTCAACTCAAAGGGTCACGCGAGATGCCTCTGTCTCTGTCCTCCTCTGCTGTGGGTATTCTTCTCCAACGCAAGAGAGTATAATCAGTGATCTAAAGCTCTCACTTTCGGAGTTCTCTCTATTCGGATCTTTATCCAACGTGGGGGCCATGGTGGGAGCCATTACCAGTGGTCAAATAGCAGAATACATCGGACGCAAAGGGTCATTGATGATTGCTGCGATCCCCAATATAATAGGATGGCTCGCCATCTCTTTTGCCCAAGACTCGTCATTTTTATTCATGGGGAGGTTTTTGGAAGGTTTTGGCGTTGGGATAATCTCTTATGTGGTGCCTGTTTATATAGCTGAGATATCACCTCAAAACATGAGAGGTACCCTTGGATCAGTGAACCAGCTCTCTGTCACAATTGGAATAATGCTGGCTTATTTGTTGGGCCTTTTTGTCAACTGGAGAGTACTTGCAGTTCTAGGAATTTTGCCTTGTACAATATTAATACCTGGATTATTTTTCATACCAGAATCTCCCAGATGGTTGGCCATGATGGGGATGACAGAAGAGTTTGAGACTTCTTTGCAAGTGTTACGAGGATTTGATACNGATATATCACTTGAAGTACATGAAATTAAGAGATCTGTGGCATCAACGGGAAAAGGAGCTACAATCCAGTTTGCAGATCTCAAGATGAAAAAATATTGGTTTCCTTTAATGGTAGGGATTGGATTACTTGTACTCCAGCAATTGAGTGGTACCAATGGAGTGCTATTCTATTCAAGTACCATCTTTGCAAATGCAGGAATTTCATCCAGTAACGCTGCTACAGTTGGACTTGGAGCTATTCAAGTCATAGCTACTGGAATCACTACTTGGTTAATGGACAAAAGTGGGCGGAGGCTACTTCTAATAATATCATCATCTATAATGACAGTAAGCCTTCTCCTGGTTTCTATAGCATTCTATCTGGAGGGAGTCACACAGGAGGATTCTCGTCTATACAGCATTTTAGGAATGCTTTCTGTTGTTGGGCTTGTGGCTATGATGATTGGCTACTCTCTTGGAGTTGGACCAATCCCTTGGCTTATAATGTCTGAGATACTTCCAGTGAATATAAAGGGCCTTGCAGGCAGCATAGCCACCTTGACTAATTGGCTAACTTCCTGGATGATCACAATGACTGCAAACTTGCTTTTGACTTGGAGCAGTGGAGGGACGTTCACAATCTACACTGTGGTAGCTGCCTTTACTGTTGTTTTTGCAGCTATGTGGGTCCCTGAGACCAAGGGAAGAACATTGGAAGAAATTCAGTTTTCCTTCAGATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00079	345014	350499	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function

GO:0005215 transporter activity

GO:0022857 transmembrane transporter activity

GO:0022891 substrate-specific transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000079s00008953.1	PF00083.19	Sugar_tr	66	471	1.20E-90

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.085
SRR1783600	control	0.093
SRR1783602	moderate drought stress	0.208
SRR1811619	moderate drought stress	0.188

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	64.704
SRR2868004	Drought Stress (root)	42.285
SRR2967015	Control (root)	30.353

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.051
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.000
SRR9715739	Root	0.048
SRR9715742	Root	0.066
SRR9715743	Root	0.064

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.399
SRR8749028	MeJA induced 9h	0.231
SRR8749029	MeJA induced 9h	0.098
SRR8749030	Uninduced	0.188
SRR8749031	Uninduced	0.072
SRR8749032	Uninduced	0.042

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.661
SRR8400027	Control - Root	1.825