Gene detail information of Glyur000079s00008951 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01230.1 | 2.00E-37 | ORMDL family protein |
| NR | XP_004510647.1 | 2.23E-62 | PREDICTED: ORM1-like protein 3-like [Cicer arietinum] |
| trEMBL | tr|I3SAF0|I3SAF0_MEDTR | 1.00E-62 | Uncharacterized protein {ECO:0000313|EMBL:AFK37242.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00079 | 337208 | 340115 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000079s00008951.1 | PF04061.9 | ORMDL | 15 | 92 | 2.70E-27 |
| Glyur000079s00008951.1 | PF04061.9 | ORMDL | 99 | 152 | 4.00E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.361 |
| SRR1783600 | control | 6.975 |
| SRR1783602 | moderate drought stress | 9.940 |
| SRR1811619 | moderate drought stress | 10.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.576 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.889 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.195 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.698 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.619 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.800 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.884 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.078 |
| SRR2868004 | Drought Stress (root) | 0.967 |
| SRR2967015 | Control (root) | 1.710 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.069 |
| SRR9715739 | Root | 0.087 |
| SRR9715742 | Root | 0.050 |
| SRR9715743 | Root | 0.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.245 |
| SRR8749028 | MeJA induced 9h | 0.072 |
| SRR8749029 | MeJA induced 9h | 0.035 |
| SRR8749030 | Uninduced | 0.349 |
| SRR8749031 | Uninduced | 0.118 |
| SRR8749032 | Uninduced | 0.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.084 |
| SRR8400027 | Control - Root | 0.027 |