Gene detail information of Glyur000079s00008945 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G50845.1 | 1.00E-57 | Protein of unknown function (DUF59) |
| NR | KHN36128.1 | 9.12E-104 | MIP18 family protein [Glycine soja] |
| Swissprot | tr|Q9C9G6|U195A_ARATH | 3.00E-59 | MIP18 family protein At1g68310 |
| trEMBL | tr|I1J8W2|I1J8W2_SOYBN | 4.00E-106 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G38230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00079 | 290213 | 293250 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 83.727 |
| SRR1783600 | control | 85.669 |
| SRR1783602 | moderate drought stress | 78.586 |
| SRR1811619 | moderate drought stress | 78.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 60.092 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 59.993 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 58.673 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 58.578 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 55.504 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 57.394 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.617 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 46.701 |
| SRR2868004 | Drought Stress (root) | 46.770 |
| SRR2967015 | Control (root) | 52.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.828 |
| SRR9715740 | Leaf | 25.867 |
| SRR9715741 | Leaf | 25.758 |
| SRR9715739 | Root | 32.900 |
| SRR9715742 | Root | 21.999 |
| SRR9715743 | Root | 23.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.271 |
| SRR8749028 | MeJA induced 9h | 16.750 |
| SRR8749029 | MeJA induced 9h | 15.505 |
| SRR8749030 | Uninduced | 9.479 |
| SRR8749031 | Uninduced | 4.078 |
| SRR8749032 | Uninduced | 5.300 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 56.837 |
| SRR8400027 | Control - Root | 59.318 |