Gene detail information of Glyur000079s00008941 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66780.1 | 2.00E-26 | |
| NR | XP_003611987.1 | 1.12E-59 | hypothetical protein MTR_5g020060 [Medicago truncatula] |
| trEMBL | tr|G7KDJ4|G7KDJ4_MEDTR | 4.00E-60 | Plant/MUD21-2 protein {ECO:0000313|EMBL:AES94945.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00079 | 268918 | 270504 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.740 |
| SRR1783600 | control | 7.819 |
| SRR1783602 | moderate drought stress | 16.162 |
| SRR1811619 | moderate drought stress | 16.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.715 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.245 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1157.792 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1127.652 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.592 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.645 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.474 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.583 |
| SRR2868004 | Drought Stress (root) | 2.611 |
| SRR2967015 | Control (root) | 2.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.887 |
| SRR9715740 | Leaf | 4.159 |
| SRR9715741 | Leaf | 6.462 |
| SRR9715739 | Root | 7.064 |
| SRR9715742 | Root | 12.770 |
| SRR9715743 | Root | 11.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.510 |
| SRR8749028 | MeJA induced 9h | 18.249 |
| SRR8749029 | MeJA induced 9h | 5.585 |
| SRR8749030 | Uninduced | 14.343 |
| SRR8749031 | Uninduced | 7.522 |
| SRR8749032 | Uninduced | 5.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.189 |
| SRR8400027 | Control - Root | 7.656 |