Gene detail information of Glyur000079s00008908 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36740.1 | 8.00E-54 | homeobox protein 40 |
| NR | XP_004512013.1 | 2.99E-103 | PREDICTED: homeobox-leucine zipper protein ATHB-40-like [Cicer arietinum] |
| Swissprot | tr|O23208|ATB40_ARATH | 7.00E-67 | Homeobox-leucine zipper protein ATHB-40 |
| trEMBL | tr|I1J8X8|I1J8X8_SOYBN | 5.00E-102 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G38390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00079 | 69110 | 71030 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000079s00008908.1 | PF00046.24 | Homeobox | 57 | 111 | 2.40E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.377 |
| SRR1783600 | control | 0.353 |
| SRR1783602 | moderate drought stress | 0.249 |
| SRR1811619 | moderate drought stress | 0.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.663 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.956 |
| SRR2868004 | Drought Stress (root) | 26.124 |
| SRR2967015 | Control (root) | 32.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.080 |
| SRR9715740 | Leaf | 5.079 |
| SRR9715741 | Leaf | 9.681 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.629 |
| SRR9715743 | Root | 0.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 90.400 |
| SRR8749028 | MeJA induced 9h | 35.062 |
| SRR8749029 | MeJA induced 9h | 26.916 |
| SRR8749030 | Uninduced | 3.425 |
| SRR8749031 | Uninduced | 2.662 |
| SRR8749032 | Uninduced | 4.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.932 |
| SRR8400027 | Control - Root | 1.765 |