Gene detail information of Glyur000079s00008900.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75080.2 | 1.00E-53 | Brassinosteroid signalling positive regulator (BZR1) family protein |
| NR | XP_003611934.1 | 1.29E-153 | BES1/BZR1-like protein [Medicago truncatula] |
| Swissprot | tr|Q94A43|BEH2_ARATH | 2.00E-107 | BES1/BZR1 homolog protein 2 |
| trEMBL | tr|G7KC60|G7KC60_MEDTR | 5.00E-154 | Brassinazole-resistant 1 protein {ECO:0000313|EMBL:AES94892.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00079 | 11322 | 13730 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | BES1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000079s00008900.1 | PF05687.8 | DUF822 | 5 | 146 | 2.30E-65 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 85.904 |
| SRR1783600 | control | 86.408 |
| SRR1783602 | moderate drought stress | 115.228 |
| SRR1811619 | moderate drought stress | 114.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 73.580 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 73.040 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 64.093 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 61.859 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 123.569 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 123.117 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 54.486 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 54.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 83.626 |
| SRR2868004 | Drought Stress (root) | 115.226 |
| SRR2967015 | Control (root) | 144.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 114.269 |
| SRR9715740 | Leaf | 88.656 |
| SRR9715741 | Leaf | 137.213 |
| SRR9715739 | Root | 101.303 |
| SRR9715742 | Root | 104.482 |
| SRR9715743 | Root | 105.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 99.967 |
| SRR8749028 | MeJA induced 9h | 112.078 |
| SRR8749029 | MeJA induced 9h | 96.231 |
| SRR8749030 | Uninduced | 49.863 |
| SRR8749031 | Uninduced | 54.158 |
| SRR8749032 | Uninduced | 53.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 80.268 |
| SRR8400027 | Control - Root | 97.402 |