Gene detail information of Glyur000078s00005442 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G16385.1 | 7.00E-07 | |
| NR | XP_004511001.1 | 1.01E-26 | PREDICTED: uncharacterized protein LOC101504121 [Cicer arietinum] |
| trEMBL | tr|K7LWK8|K7LWK8_SOYBN | 1.00E-27 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G36411.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00078 | 347932 | 349387 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.278 |
| SRR1783600 | control | 31.534 |
| SRR1783602 | moderate drought stress | 11.141 |
| SRR1811619 | moderate drought stress | 10.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.816 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.270 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.307 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.722 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.181 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.079 |
| SRR2868004 | Drought Stress (root) | 42.641 |
| SRR2967015 | Control (root) | 41.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.630 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.257 |
| SRR9715739 | Root | 11.915 |
| SRR9715742 | Root | 4.439 |
| SRR9715743 | Root | 5.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.144 |
| SRR8749028 | MeJA induced 9h | 0.232 |
| SRR8749029 | MeJA induced 9h | 0.233 |
| SRR8749030 | Uninduced | 1.286 |
| SRR8749031 | Uninduced | 1.816 |
| SRR8749032 | Uninduced | 2.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.460 |
| SRR8400027 | Control - Root | 34.122 |