Gene detail information of Glyur000078s00005422 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66440.1 | 5.00E-11 | |
| NR | XP_004500801.1 | 3.62E-73 | PREDICTED: uncharacterized protein LOC101490934 [Cicer arietinum] |
| trEMBL | tr|G7J762|G7J762_MEDTR | 4.00E-72 | Transmembrane protein, putative {ECO:0000313|EMBL:AES74211.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00078 | 258008 | 258994 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000078s00005422.1 | PF14364.1 | DUF4408 | 50 | 86 | 6.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.650 |
| SRR1783600 | control | 31.188 |
| SRR1783602 | moderate drought stress | 10.831 |
| SRR1811619 | moderate drought stress | 11.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 64.547 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 57.462 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 31.593 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.799 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 113.889 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 101.073 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.710 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.420 |
| SRR2868004 | Drought Stress (root) | 37.476 |
| SRR2967015 | Control (root) | 45.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.683 |
| SRR9715740 | Leaf | 25.007 |
| SRR9715741 | Leaf | 26.303 |
| SRR9715739 | Root | 1.114 |
| SRR9715742 | Root | 25.956 |
| SRR9715743 | Root | 25.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.143 |
| SRR8749028 | MeJA induced 9h | 0.136 |
| SRR8749029 | MeJA induced 9h | 0.123 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.604 |
| SRR8400027 | Control - Root | 23.969 |