Gene detail information of Glyur000078s00005418 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17080.1 | 4.00E-34 | Arabidopsis protein of unknown function (DUF241) |
| NR | KHN20057.1 | 1.45E-160 | hypothetical protein glysoja_014635 [Glycine soja] |
| trEMBL | tr|I1K762|I1K762_SOYBN | 2.00E-160 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G01340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00078 | 240092 | 240967 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000078s00005418.1 | PF03087.9 | DUF241 | 52 | 288 | 1.10E-54 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.275 |
| SRR1783600 | control | 2.643 |
| SRR1783602 | moderate drought stress | 2.034 |
| SRR1811619 | moderate drought stress | 1.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.056 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.798 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.632 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.628 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.495 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.419 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.297 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.083 |
| SRR2868004 | Drought Stress (root) | 5.645 |
| SRR2967015 | Control (root) | 4.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.572 |
| SRR9715740 | Leaf | 2.210 |
| SRR9715741 | Leaf | 2.786 |
| SRR9715739 | Root | 0.152 |
| SRR9715742 | Root | 0.312 |
| SRR9715743 | Root | 0.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.435 |
| SRR8749028 | MeJA induced 9h | 2.000 |
| SRR8749029 | MeJA induced 9h | 3.110 |
| SRR8749030 | Uninduced | 1.253 |
| SRR8749031 | Uninduced | 1.743 |
| SRR8749032 | Uninduced | 2.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.654 |
| SRR8400027 | Control - Root | 4.692 |