Gene detail information of Glyur000078s00005390 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34490.1 | 6.00E-180 | cyclase associated protein 1 |
| NR | AFK47086.1 | 0 | unknown [Lotus japonicus] |
| Swissprot | tr|O65902|ACAP1_ARATH | 0 | Cyclase-associated protein 1 |
| trEMBL | tr|I3T3J4|I3T3J4_LOTJA | 0 | Adenylyl cyclase-associated protein {ECO:0000256|RuleBase:RU000647} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00078 | 125599 | 130128 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000078s00005390.1 | PF01213.14 | CAP_N | 3 | 292 | 7.20E-63 |
| Glyur000078s00005390.1 | PF08603.6 | CAP_C | 308 | 467 | 2.60E-58 |
| Glyur000078s00005390.2 | PF01213.14 | CAP_N | 3 | 266 | 1.10E-55 |
| Glyur000078s00005390.3 | PF01213.14 | CAP_N | 3 | 266 | 1.10E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.156 |
| SRR1783600 | control | 13.052 |
| SRR1783602 | moderate drought stress | 9.292 |
| SRR1811619 | moderate drought stress | 9.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.038 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.083 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.652 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.047 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.793 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.909 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.625 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.414 |
| SRR2868004 | Drought Stress (root) | 33.773 |
| SRR2967015 | Control (root) | 34.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.398 |
| SRR9715740 | Leaf | 22.201 |
| SRR9715741 | Leaf | 15.296 |
| SRR9715739 | Root | 9.521 |
| SRR9715742 | Root | 14.457 |
| SRR9715743 | Root | 13.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.097 |
| SRR8749028 | MeJA induced 9h | 18.624 |
| SRR8749029 | MeJA induced 9h | 13.224 |
| SRR8749030 | Uninduced | 6.995 |
| SRR8749031 | Uninduced | 3.714 |
| SRR8749032 | Uninduced | 4.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.634 |
| SRR8400027 | Control - Root | 45.727 |