Gene detail information of Glyur000078s00005378 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004500817.1 | 1.53E-58 | PREDICTED: uncharacterized protein DDB_G0283697-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|P17772|OSS2_PEA | 1.00E-43 | Organ-specific protein S2 |
| trEMBL | tr|Q39448|Q39448_CICAR | 5.00E-58 | Specific tissue protein 2 {ECO:0000313|EMBL:CAA66109.3} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00078 | 88881 | 90386 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000078s00005378.1 | PF10950.3 | DUF2775 | 23 | 101 | 1.20E-13 |
| Glyur000078s00005378.1 | PF10950.3 | DUF2775 | 102 | 165 | 7.30E-28 |
| Glyur000078s00005378.1 | PF10950.3 | DUF2775 | 138 | 188 | 7.20E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.776 |
| SRR1783600 | control | 11.583 |
| SRR1783602 | moderate drought stress | 5.575 |
| SRR1811619 | moderate drought stress | 5.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.526 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.284 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.652 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.794 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3414.557 |
| SRR2868004 | Drought Stress (root) | 1907.824 |
| SRR2967015 | Control (root) | 3102.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.508 |
| SRR9715740 | Leaf | 0.065 |
| SRR9715741 | Leaf | 0.343 |
| SRR9715739 | Root | 4.122 |
| SRR9715742 | Root | 13.103 |
| SRR9715743 | Root | 11.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.210 |
| SRR8749029 | MeJA induced 9h | 0.194 |
| SRR8749030 | Uninduced | 0.300 |
| SRR8749031 | Uninduced | 0.317 |
| SRR8749032 | Uninduced | 0.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 900.373 |
| SRR8400027 | Control - Root | 396.029 |