Gene detail information of Glyur000078s00005375 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49310.1 | 2.00E-07 | |
| NR | XP_003522958.1 | 9.51E-36 | PREDICTED: organ-specific protein S2-like [Glycine max] |
| trEMBL | tr|I1JSP8|I1JSP8_SOYBN | 4.00E-36 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G01490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00078 | 74504 | 75392 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000078s00005375.1 | PF10950.3 | DUF2775 | 26 | 91 | 1.30E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.257 |
| SRR1783600 | control | 6.341 |
| SRR1783602 | moderate drought stress | 11.159 |
| SRR1811619 | moderate drought stress | 10.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.681 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.539 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.287 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.300 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.387 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.588 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.249 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 78.070 |
| SRR2868004 | Drought Stress (root) | 69.934 |
| SRR2967015 | Control (root) | 62.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 44.725 |
| SRR9715740 | Leaf | 53.971 |
| SRR9715741 | Leaf | 81.907 |
| SRR9715739 | Root | 7.885 |
| SRR9715742 | Root | 11.877 |
| SRR9715743 | Root | 11.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.015 |
| SRR8749028 | MeJA induced 9h | 26.718 |
| SRR8749029 | MeJA induced 9h | 25.894 |
| SRR8749030 | Uninduced | 73.393 |
| SRR8749031 | Uninduced | 92.170 |
| SRR8749032 | Uninduced | 64.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 77.945 |
| SRR8400027 | Control - Root | 29.073 |