Gene detail

Gene detail information of Glyur000078s00005374

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G49320.1	7.00E-59	unknown seed protein like 1
NR	ACU20119.1	4.05E-158	unknown [Glycine max]
Swissprot	tr\|B9G9L9\|BURPH_ORYSJ	7.00E-54	BURP domain-containing protein 17 (Precursor)
trEMBL	tr\|C6TE67\|C6TE67_SOYBN	2.00E-158	Putative uncharacterized protein {ECO:0000313\|EMBL:ACU20119.1}

Sequence

Transcript Sequence

>Glyur000078s00005374.1
ATAATGTCAGTCAACTTAAAACACATTGTTATTTGCATTTGCTCAGTATATCAAATAGTTCATTCACGAGGTCCACGCCAATCTAAAAACAAACTGCACTAACAATCTAACATAACGAGGTCAATGAAAAGCTTGGCCAGGTTTTCCATGTGAACCACCGCAAGGTTCTGAATCCTTAGCTGTCTAGTTTTCCCAAACACCCGACCCTTTTATTCACTCCCTATTCCATTTTTTATTCCACCAGAAGCTACTAGTATAGAACACAAATTAAGGTCTGAAGAAGATGAGACTCGGAATTGCTTCTTGGAGCTTCATCCTATGCACCCTTCTTGTCTTTGTGATTGTGAAAGACAGTGATGCCAGAAAGATAGCCACAACATCTGGGAAAGATGATGTTTCCTATGAGGGTCATGTACTTGGTAATATCATGCAGGTTGAAAGCACTGATGCAGAAATGAAAAAGAAGCATGCCCAAAAGGATGATCACAATCACAAAATGGACCCTGAACTGAATGTGTTTTTCATCCCAACTGATTTAAAAGTTGGGAAAACAATGCCCATCTATTTCTCCAAGAAAGACTCTTCAACATCTCCAAAGTTTCTTCCCAGAGAAGAAGCTGACCAGATTCCTTTCACAGCAAAACAACTACCTTTCCTCCTGGATTTCTTCTCTATTTCAAAACACTCCCCACAAGCCAAGGCCATGGAATACACACTCGAACAGTGTGAATTTGAACCCATGGAAGGAGAGACCAAGTTCTGCGCCACTTCCCTTGAGTCTTTGTTTGGTTTTGCACGCCACCTGTTTGGATCTAATGCACAATTCAAGNTTTTGACCACTACCCATCTCACAGAATCCCCGGTCCTTTTGCAGAACTACACAATCTCACAGGTGAAAGAGGTTTCAGTTCCAAGTGTCATAGGGTGTCACCCCATGCCTTACCCTTTTGCAGTTTTCTACTGCCACAGCCAACAGGGTGACACTGGTTTNTATGAGGTGTTGGTGNAAGGTGAGAATGGAGGGAGAGTTCAAGCTGCAGCTATTTGTCACATGGATACTTCTAAGTGGGATGTGGATCACGTGGCCTTTCGTGTGCTCAAGGTTCAGCNAGGAACCTCCCCTGTGTGTCATTTCTTCCCTTCTGATAATCTTGTCTGGGTGCCTTTGCCTGAGGGTTCTTGAATCTTGATCAGAGTCTGGTTCTGTTTCTGTATATGATGAAACTGTGTCAGCTTCTATAGACATGGTGTATTACTTAGGAAGCGCTTCTTGATGCAAAACAAAACTATGTATCTATACGAATAAATTAAGATGTTATTTTGGTGTGGTTTATTTAGTAATTAGTAATCCTTATCTTGTGCATATGTTCATTTGATTAGTAATGGATGAAGCTTCAGAGTTGGCCTTGTTAACCGAGTTAGAGTGTGAGCTTGAATTAATTATGGGGNAGAGAATAGATATTCATACTCAATATAATGAATTCATCGTTCCTCCTCCATATGAGCTGCATAAAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00078	66686	68418	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000078s00005374.1	PF03181.10	BURP	78	294	1.60E-72

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	24.087
SRR1783600	control	24.194
SRR1783602	moderate drought stress	23.159
SRR1811619	moderate drought stress	23.251

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	31.055
DRR006520	Root Summer glycyrrhizin high producing strain	30.908
DRR006521	Root Winter glycyrrhizin high producing strain	6.743
DRR006522	Root Winter glycyrrhizin high producing strain	6.479
DRR006523	Root Summer glycyrrhizin low producing strain	17.688
DRR006524	Root Summer glycyrrhizin low producing strain	17.930
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.612
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.593

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	78.619
SRR2868004	Drought Stress (root)	94.843
SRR2967015	Control (root)	82.449

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	24.934
SRR9715740	Leaf	25.267
SRR9715741	Leaf	56.426
SRR9715739	Root	26.855
SRR9715742	Root	45.213
SRR9715743	Root	42.161

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.882
SRR8749028	MeJA induced 9h	29.678
SRR8749029	MeJA induced 9h	18.907
SRR8749030	Uninduced	54.979
SRR8749031	Uninduced	53.686
SRR8749032	Uninduced	48.098

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	60.958
SRR8400027	Control - Root	25.322