Gene detail information of Glyur000077s00006724 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G19800.2 | 6.00E-37 | Protein of unknown function (DUF177) |
| NR | XP_004505731.1 | 5.04E-108 | PREDICTED: uncharacterized protein LOC101505578 [Cicer arietinum] |
| trEMBL | tr|B7FKN0|B7FKN0_MEDTR | 2.00E-98 | Uncharacterized protein {ECO:0000313|EMBL:AFK40306.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00077 | 310418 | 314169 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000077s00006724.2 | PF02620.12 | DUF177 | 131 | 245 | 7.60E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.038 |
| SRR1811619 | moderate drought stress | 0.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.113 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.209 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 104.173 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 103.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.257 |
| SRR2868004 | Drought Stress (root) | 0.319 |
| SRR2967015 | Control (root) | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 35.649 |
| SRR9715740 | Leaf | 74.261 |
| SRR9715741 | Leaf | 47.163 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.031 |
| SRR9715743 | Root | 0.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.693 |
| SRR8749028 | MeJA induced 9h | 0.387 |
| SRR8749029 | MeJA induced 9h | 0.425 |
| SRR8749030 | Uninduced | 0.377 |
| SRR8749031 | Uninduced | 0.077 |
| SRR8749032 | Uninduced | 0.843 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.257 |
| SRR8400027 | Control - Root | 1.046 |