Gene detail information of Glyur000077s00006722 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18400.3 | 6.00E-11 | Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis |
| NR | XP_011026314.1 | 5.93E-12 | PREDICTED: anamorsin homolog [Populus euphratica] |
| Swissprot | tr|B9RBT0|DRE2_RICCO | 1.00E-13 | Anamorsin homolog {ECO:0000255|HAMAP-Rule:MF_03115} |
| trEMBL | tr|A0A061DQN7|A0A061DQN7_THECC | 5.00E-12 | Anamorsin homolog {ECO:0000256|HAMAP-Rule:MF_03115} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00077 | 304430 | 306102 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000077s00006722.1 | PF05093.8 | CIAPIN1 | 31 | 69 | 9.90E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.310 |
| SRR1783600 | control | 10.365 |
| SRR1783602 | moderate drought stress | 9.916 |
| SRR1811619 | moderate drought stress | 10.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.196 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.606 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 50.680 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 59.847 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.038 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.972 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.018 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.312 |
| SRR2868004 | Drought Stress (root) | 32.144 |
| SRR2967015 | Control (root) | 26.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.616 |
| SRR9715740 | Leaf | 30.193 |
| SRR9715741 | Leaf | 27.547 |
| SRR9715739 | Root | 13.275 |
| SRR9715742 | Root | 18.783 |
| SRR9715743 | Root | 21.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 66.982 |
| SRR8749028 | MeJA induced 9h | 28.817 |
| SRR8749029 | MeJA induced 9h | 68.022 |
| SRR8749030 | Uninduced | 37.539 |
| SRR8749031 | Uninduced | 33.261 |
| SRR8749032 | Uninduced | 58.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.417 |
| SRR8400027 | Control - Root | 27.752 |