Gene detail information of Glyur000077s00006720 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18400.3 | 2.00E-24 | Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis |
| NR | XP_004499604.1 | 5.20E-103 | PREDICTED: anamorsin homolog [Cicer arietinum] |
| Swissprot | tr|B7FNA9|DRE2_MEDTR | 2.00E-95 | Anamorsin homolog {ECO:0000255|HAMAP-Rule:MF_03115} |
| trEMBL | tr|I3S951|I3S951_LOTJA | 3.00E-97 | Anamorsin homolog {ECO:0000256|HAMAP-Rule:MF_03115} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00077 | 301358 | 303697 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.949 |
| SRR1783600 | control | 13.402 |
| SRR1783602 | moderate drought stress | 13.011 |
| SRR1811619 | moderate drought stress | 12.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 40.141 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.155 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 94.178 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 89.374 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.476 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 44.788 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.475 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 62.191 |
| SRR2868004 | Drought Stress (root) | 61.784 |
| SRR2967015 | Control (root) | 55.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.114 |
| SRR9715740 | Leaf | 42.306 |
| SRR9715741 | Leaf | 42.647 |
| SRR9715739 | Root | 18.086 |
| SRR9715742 | Root | 35.596 |
| SRR9715743 | Root | 33.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 185.603 |
| SRR8749028 | MeJA induced 9h | 109.094 |
| SRR8749029 | MeJA induced 9h | 174.907 |
| SRR8749030 | Uninduced | 87.208 |
| SRR8749031 | Uninduced | 101.529 |
| SRR8749032 | Uninduced | 132.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 54.966 |
| SRR8400027 | Control - Root | 52.168 |