Gene detail information of Glyur000077s00006718 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G19870.1 | 0 | |
| NR | KHN05436.1 | 0 | hypothetical protein glysoja_020401 [Glycine soja] |
| Swissprot | tr|B8LPG7|DRE22_PICSI | 1.00E-09 | Anamorsin homolog 2 {ECO:0000255|HAMAP-Rule:MF_03115} |
| trEMBL | tr|I1LPK5|I1LPK5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G03160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00077 | 290335 | 295339 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000077s00006718.2 | PF05093.8 | CIAPIN1 | 20 | 46 | 1.40E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.953 |
| SRR1783600 | control | 7.876 |
| SRR1783602 | moderate drought stress | 8.106 |
| SRR1811619 | moderate drought stress | 7.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.838 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.850 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.949 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.004 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.714 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.895 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.440 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.149 |
| SRR2868004 | Drought Stress (root) | 6.377 |
| SRR2967015 | Control (root) | 6.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.490 |
| SRR9715740 | Leaf | 3.461 |
| SRR9715741 | Leaf | 3.191 |
| SRR9715739 | Root | 5.164 |
| SRR9715742 | Root | 6.966 |
| SRR9715743 | Root | 6.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.341 |
| SRR8749028 | MeJA induced 9h | 2.144 |
| SRR8749029 | MeJA induced 9h | 1.140 |
| SRR8749030 | Uninduced | 0.583 |
| SRR8749031 | Uninduced | 0.654 |
| SRR8749032 | Uninduced | 0.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.028 |
| SRR8400027 | Control - Root | 6.971 |