Gene detail information of Glyur000077s00006710


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G62870.11.00E-115Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
NRXP_004505741.15.42E-178PREDICTED: 60S ribosomal protein L7a-like [Cicer arietinum]
COGYP_006363103.11.00E-1150S ribosomal protein L7Ae [Thermogladius cellulolyticus 1633]
Swissprottr|P35685|RL7A_ORYSJ1.00E-17060S ribosomal protein L7a
trEMBLtr|I3T063|I3T063_MEDTR7.00E-178Uncharacterized protein {ECO:0000313|EMBL:AFK45905.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00077231024232982+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0042254  ribosome biogenesis


cellular_component

GO:0030529  intracellular ribonucleoprotein complex



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000077s00006710.1PF01248.21Ribosomal_L7Ae1162051.70E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control129.542
SRR1783600control133.084
SRR1783602moderate drought stress120.978
SRR1811619moderate drought stress121.433

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain214.641
DRR006520Root Summer glycyrrhizin high producing strain216.314
DRR006521Root Winter glycyrrhizin high producing strain94.088
DRR006522Root Winter glycyrrhizin high producing strain94.032
DRR006523Root Summer glycyrrhizin low producing strain185.438
DRR006524Root Summer glycyrrhizin low producing strain186.610
DRR006525Leaf Summer glycyrrhizin high producing strain67.596
DRR006526Leaf Summer glycyrrhizin high producing strain68.439

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)373.379
SRR2868004Drought Stress (root)188.759
SRR2967015Control (root)200.660

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf149.187
SRR9715740Leaf133.139
SRR9715741Leaf113.422
SRR9715739Root157.428
SRR9715742Root194.632
SRR9715743Root176.354

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h660.209
SRR8749028MeJA induced 9h242.382
SRR8749029MeJA induced 9h348.845
SRR8749030Uninduced35.133
SRR8749031Uninduced19.889
SRR8749032Uninduced51.901

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root326.474
SRR8400027Control - Root280.045

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved