Gene detail information of Glyur000077s00006704 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G19900.1 | 5.00E-61 | |
| NR | XP_006590834.1 | 2.51E-133 | PREDICTED: uncharacterized protein LOC100794949 isoform X1 [Glycine max] |
| trEMBL | tr|I1LIW2|I1LIW2_SOYBN | 9.00E-134 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G11080.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00077 | 198431 | 201244 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000077s00006704.1 | PF11267.3 | DUF3067 | 122 | 224 | 2.00E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.416 |
| SRR1783600 | control | 0.298 |
| SRR1783602 | moderate drought stress | 0.949 |
| SRR1811619 | moderate drought stress | 0.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.216 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.345 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.728 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.936 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.458 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.823 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 138.787 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 137.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.856 |
| SRR2868004 | Drought Stress (root) | 14.244 |
| SRR2967015 | Control (root) | 10.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 134.267 |
| SRR9715740 | Leaf | 218.903 |
| SRR9715741 | Leaf | 172.591 |
| SRR9715739 | Root | 0.588 |
| SRR9715742 | Root | 2.719 |
| SRR9715743 | Root | 1.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.632 |
| SRR8749028 | MeJA induced 9h | 4.824 |
| SRR8749029 | MeJA induced 9h | 1.627 |
| SRR8749030 | Uninduced | 7.971 |
| SRR8749031 | Uninduced | 4.114 |
| SRR8749032 | Uninduced | 4.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.655 |
| SRR8400027 | Control - Root | 4.059 |