Gene detail information of Glyur000077s00006689 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21100.1 | 9.00E-65 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | XP_003540811.2 | 1.19E-108 | PREDICTED: dirigent protein 23-like [Glycine max] |
| Swissprot | tr|Q84TH6|DIR23_ARATH | 5.00E-81 | Dirigent protein 23 (Precursor) |
| trEMBL | tr|I1LPN3|I1LPN3_SOYBN | 4.00E-109 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G03420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00077 | 95736 | 96317 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000077s00006689.1 | PF03018.9 | Dirigent | 47 | 193 | 6.50E-52 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.395 |
| SRR1783600 | control | 26.898 |
| SRR1783602 | moderate drought stress | 11.202 |
| SRR1811619 | moderate drought stress | 11.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.362 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.231 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.383 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.339 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.212 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.427 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.662 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 204.431 |
| SRR2868004 | Drought Stress (root) | 100.658 |
| SRR2967015 | Control (root) | 113.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.600 |
| SRR9715740 | Leaf | 11.234 |
| SRR9715741 | Leaf | 10.954 |
| SRR9715739 | Root | 112.562 |
| SRR9715742 | Root | 23.136 |
| SRR9715743 | Root | 41.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.644 |
| SRR8749028 | MeJA induced 9h | 1.678 |
| SRR8749029 | MeJA induced 9h | 0.658 |
| SRR8749030 | Uninduced | 1.794 |
| SRR8749031 | Uninduced | 3.359 |
| SRR8749032 | Uninduced | 1.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 199.327 |
| SRR8400027 | Control - Root | 182.351 |