Gene detail information of Glyur000077s00006685 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38690.1 | 2.00E-132 | PLC-like phosphodiesterases superfamily protein |
| NR | XP_003540822.1 | 0 | PREDICTED: uncharacterized protein LOC100789013 [Glycine max] |
| trEMBL | tr|I1LPN5|I1LPN5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G03450.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00077 | 78337 | 79290 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000077s00006685.1 | PF00388.14 | PI-PLC-X | 79 | 172 | 4.70E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.848 |
| SRR1783600 | control | 16.009 |
| SRR1783602 | moderate drought stress | 16.794 |
| SRR1811619 | moderate drought stress | 16.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.537 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.582 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.117 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.114 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.791 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.245 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.736 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.370 |
| SRR2868004 | Drought Stress (root) | 90.719 |
| SRR2967015 | Control (root) | 67.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.485 |
| SRR9715740 | Leaf | 8.750 |
| SRR9715741 | Leaf | 5.463 |
| SRR9715739 | Root | 2.342 |
| SRR9715742 | Root | 3.572 |
| SRR9715743 | Root | 3.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.723 |
| SRR8749028 | MeJA induced 9h | 25.581 |
| SRR8749029 | MeJA induced 9h | 15.948 |
| SRR8749030 | Uninduced | 7.864 |
| SRR8749031 | Uninduced | 4.587 |
| SRR8749032 | Uninduced | 2.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.937 |
| SRR8400027 | Control - Root | 18.319 |