Gene detail information of Glyur000077s00006683 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36040.1 | 1.00E-22 | Chaperone DnaJ-domain superfamily protein |
| NR | NP_001236960.1 | 3.37E-46 | uncharacterized protein LOC100305807 [Glycine max] |
| COG | YP_003825295.1 | 2.00E-11 | chaperone protein DnaJ [Thermosediminibacter oceani DSM 16646] |
| Swissprot | tr|Q9FYB5|DNJ11_ARATH | 1.00E-27 | Chaperone protein dnaJ 11, chloroplastic (Precursor) |
| trEMBL | tr|C6SWQ1|C6SWQ1_SOYBN | 1.00E-46 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G11280.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00077 | 68820 | 69098 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000077s00006683.1 | PF00226.26 | DnaJ | 4 | 56 | 4.20E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.468 |
| SRR1783600 | control | 0.160 |
| SRR1783602 | moderate drought stress | 0.946 |
| SRR1811619 | moderate drought stress | 0.700 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.499 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.051 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.800 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.854 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.184 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.719 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.583 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.237 |
| SRR2868004 | Drought Stress (root) | 10.800 |
| SRR2967015 | Control (root) | 22.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.415 |
| SRR9715740 | Leaf | 12.328 |
| SRR9715741 | Leaf | 49.636 |
| SRR9715739 | Root | 0.106 |
| SRR9715742 | Root | 0.165 |
| SRR9715743 | Root | 1.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.460 |
| SRR8749028 | MeJA induced 9h | 6.039 |
| SRR8749029 | MeJA induced 9h | 3.765 |
| SRR8749030 | Uninduced | 0.244 |
| SRR8749031 | Uninduced | 0.607 |
| SRR8749032 | Uninduced | 1.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.661 |
| SRR8400027 | Control - Root | 0.392 |