Gene detail information of Glyur000077s00006676 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21050.1 | 4.00E-78 | like AUXIN RESISTANT 2 |
| NR | XP_007131693.1 | 1.87E-98 | hypothetical protein PHAVU_011G034000g [Phaseolus vulgaris] |
| Swissprot | tr|Q8L883|LAX5_MEDTR | 2.00E-99 | Auxin transporter-like protein 5 |
| trEMBL | tr|V7ADR7|V7ADR7_PHAVU | 7.00E-99 | Uncharacterized protein {ECO:0000313|EMBL:ESW03687.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00077 | 39013 | 44782 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000077s00006676.1 | PF01490.13 | Aa_trans | 37 | 152 | 4.50E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.103 |
| SRR1783600 | control | 3.232 |
| SRR1783602 | moderate drought stress | 3.061 |
| SRR1811619 | moderate drought stress | 2.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.334 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.238 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.264 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.264 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.162 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.082 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.847 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.970 |
| SRR2868004 | Drought Stress (root) | 16.218 |
| SRR2967015 | Control (root) | 18.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.069 |
| SRR9715740 | Leaf | 3.665 |
| SRR9715741 | Leaf | 3.155 |
| SRR9715739 | Root | 2.087 |
| SRR9715742 | Root | 5.401 |
| SRR9715743 | Root | 4.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.199 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.096 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.040 |
| SRR8400027 | Control - Root | 13.944 |