Gene detail information of Glyur000077s00006671 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38660.1 | 5.00E-93 | Pathogenesis-related thaumatin superfamily protein |
| NR | XP_004505780.1 | 7.59E-165 | PREDICTED: thaumatin-like protein 1-like [Cicer arietinum] |
| Swissprot | tr|P50699|TLPH_ARATH | 2.00E-77 | Thaumatin-like protein (Precursor) |
| trEMBL | tr|I1LPR0|I1LPR0_SOYBN | 8.00E-163 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G03510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00077 | 17022 | 19426 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000077s00006671.1 | PF00314.12 | Thaumatin | 21 | 221 | 3.90E-80 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 100.503 |
| SRR1783600 | control | 101.226 |
| SRR1783602 | moderate drought stress | 50.468 |
| SRR1811619 | moderate drought stress | 50.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 75.394 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 74.668 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.067 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.068 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.374 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 37.754 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.626 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 82.176 |
| SRR2868004 | Drought Stress (root) | 62.985 |
| SRR2967015 | Control (root) | 67.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.272 |
| SRR9715740 | Leaf | 2.300 |
| SRR9715741 | Leaf | 2.907 |
| SRR9715739 | Root | 146.471 |
| SRR9715742 | Root | 66.915 |
| SRR9715743 | Root | 82.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 77.341 |
| SRR8749028 | MeJA induced 9h | 9.777 |
| SRR8749029 | MeJA induced 9h | 16.986 |
| SRR8749030 | Uninduced | 0.079 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 143.864 |
| SRR8400027 | Control - Root | 205.870 |