Gene detail information of Glyur000077s00006670 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001063788.1 | 8.70E-15 | Os09g0536800 [Oryza sativa Japonica Group] |
| trEMBL | tr|Q69JG3|Q69JG3_ORYSJ | 3.00E-15 | Putative uncharacterized protein P0569E11.24 {ECO:0000313|EMBL:BAD34228.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00077 | 10881 | 11177 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 80.053 |
| SRR1783600 | control | 95.840 |
| SRR1783602 | moderate drought stress | 71.124 |
| SRR1811619 | moderate drought stress | 75.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.357 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.311 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.997 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.459 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.606 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.431 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.341 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 30.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.027 |
| SRR2868004 | Drought Stress (root) | 2.112 |
| SRR2967015 | Control (root) | 2.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.809 |
| SRR9715740 | Leaf | 0.964 |
| SRR9715741 | Leaf | 2.316 |
| SRR9715739 | Root | 0.136 |
| SRR9715742 | Root | 12.263 |
| SRR9715743 | Root | 9.843 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.518 |
| SRR8749028 | MeJA induced 9h | 0.328 |
| SRR8749029 | MeJA induced 9h | 1.097 |
| SRR8749030 | Uninduced | 0.307 |
| SRR8749031 | Uninduced | 0.511 |
| SRR8749032 | Uninduced | 2.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.031 |
| SRR8400027 | Control - Root | 0.981 |