Gene detail

Gene detail information of Glyur000076s00018620

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G25100.1	cell division cycle 45
NR	XP_004491707.1	PREDICTED: cell division control protein 45 homolog [Cicer arietinum]
trEMBL	tr\|A0A072TYP8\|A0A072TYP8_MEDTR	Cell division control-like protein {ECO:0000313\|EMBL:KEH22629.1}

Sequence

Transcript Sequence

>Glyur000076s00018620.1
ATGAGAGAACAGAGGGTAGATTCCTTCTACGCCAAGCTGCGCGAATCAGCACTCTCTTCATCTTCCTCTCCGGTTCTCATTTTCCCTTCAACCTCAGACGTTGACTCCCTCTGNGCCCTCAAAATCATCTTCCACATCCTCGAATCCGATTCCATCCAATACGCCTGCTACCCAGTGTCGTCTTTCCGCGAGATCCACCAATACGCGGGCCCCACCACAAACTCAAACGACGACCCCATCTCCATCGTTTTGATTAACTGGGGCTGCCACAGGGACCTCAGAAGAACCCTAAAATTGGGCCCCACCGCACGGATCTTCGTCATCGACAGCCACCGCCCCATCCACCTCCACAACCTCAACGACCAAAACGACACCGTCGTTGTCCTCTTCACTAACGAAGACGAGAAGCAAGCCGATCTAGCATACGACTTCGAGTTCCCCCTCACCACCCTTGCCAACGCCTCAACCAACATCGACTCCGACTCCGAACCCGAATCCGAGCCTGACTCCGACTCCGAATCAGACTCCGATTCCGAATCAGACTCCGAACCTAAAAGGAAAAAACGAAAGAAGGATTCCGAAGATGATGAAGATGAAGAAGAGGAAGAAGAAGACCCGATTAAACTCTATAGGAGAAGAAAGAAAGAGTATTATCGATTGGGAACGTTCCACGGGAAACCCTCGGGGTGTTTGATGTATGAGCTGGCACATTTTCTGAGGAAGAACACGAACGAGTTGCTATGGCTAGCTTGCGTGGCGTTAACGGACCAATTCGTTCACGAGAGGCTAAGCGACGAGCGTTACCGTGACGGCGTGATGGAGCTGGAGCAGTACATAAACAGCTCCGGCAACCTCGACGCCGTNACCTCCGTCACGCTGAAAGACGGAACCAAGATCCGAGCACCGAACTCGTCGCGAATCGCCTACGAGGACGAACCGAAGCTCATGTTGCTTCAGGAGTGGAACCTCTTCGATTCCATGCTTTGTTCTTCCTACATCGCGACGAAGCTGAAGACGTGGAGCGACAACGGTATGAAGAAGTTGAAGCTATTGTTGGCGAGGATGGGTTTCGCGCTCAGCGATTGCCAGCAGAAGTTTCAGTACATGAACGTCGAGGTGAAAAGGAAGATGAAGAGCGAGTTCGAGAGGTTTTTACCTGAGTACGGACTCACCGATTTCTACTACCGAGGGTTTCTGAGGATACATGGTTACAGTTCTAGGGTTTCTGCTGCTGACGTGGTGTATGGTGTTACCGCGCTTTTGGAGTCGTTTGTGAAATCGGATGGTTCNTGTGCTTCGAAGCAGTTCGGTGTTGCCTACGATGCGCTTTCGTTGGGGAACATTGATAAGCTCAAGATTGGGATGCAACAGGCCATTAGGGTTCAGAGGGCGATTTTGAGGCAAGGGAGTACGGCGATTATGAAGAGTGGGTGTATTCGGAGTGGGAGGAAGTTCCGTTGGGTGAAGCTTGAGGATTCTGGGGATGCTAGGCTTTTGGGGTACCCTCAGGCTTTGACCAAGTTCTGTTATTTTCTTATGGATGCTTTGAGGGAAAAGGGGGCTAGGATGAAGCCCTTGATATGTGCTTGTTTGTCTCAGGAACCTGGGAAAGTGCTTGTTGTTGGTGTTTGTGGGAGGCCGCGATTGGCTGCGGCGCAGGGGAACGCGTTTGGGGCCGCGTTTCGGATTGCCGCGGAGGAGATCGGGGCTGAGTTCTTCCATGAGCTGTTCGAGTCGTCGTGGATTGTTCTTGAGGCTTCTGCTGTGAACTCTTTCATGGTCAGGTTGACTGAGAAACTGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00076	316807	318609	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006270 DNA replication initiation

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000076s00018620.1	PF02724.9	CDC45	25	599	7.60E-136

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.116
SRR1783600	control	4.224
SRR1783602	moderate drought stress	2.841
SRR1811619	moderate drought stress	2.875

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.471
DRR006520	Root Summer glycyrrhizin high producing strain	7.422
DRR006521	Root Winter glycyrrhizin high producing strain	4.933
DRR006522	Root Winter glycyrrhizin high producing strain	4.637
DRR006523	Root Summer glycyrrhizin low producing strain	10.947
DRR006524	Root Summer glycyrrhizin low producing strain	11.021
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.071
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.790

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.073
SRR2868004	Drought Stress (root)	7.823
SRR2967015	Control (root)	6.422

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.607
SRR9715740	Leaf	2.031
SRR9715741	Leaf	1.209
SRR9715739	Root	6.628
SRR9715742	Root	3.521
SRR9715743	Root	3.028

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.737
SRR8749028	MeJA induced 9h	3.651
SRR8749029	MeJA induced 9h	2.774
SRR8749030	Uninduced	1.067
SRR8749031	Uninduced	0.643
SRR8749032	Uninduced	1.316

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.961
SRR8400027	Control - Root	4.799