Gene detail

Gene detail information of Glyur000076s00018615

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G18480.1	1.00E-137	Calcineurin-like metallo-phosphoesterase superfamily protein
NR	XP_004513795.1	0	PREDICTED: uncharacterized protein At1g18480-like [Cicer arietinum]
COG	YP_008147855.1	1.00E-53	hypothetical protein SCE1572_07000 [Sorangium cellulosum So0157-2]
Swissprot	tr\|Q944L7\|Y1480_ARATH	3.00E-177	Uncharacterized protein At1g18480
trEMBL	tr\|K7MWX7\|K7MWX7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G13655.2}

Sequence

Transcript Sequence

>Glyur000076s00018615.1
ATGGAAGGGAAAGAAGAGACATCNACCTCAACCTCATTCTGCAAACACATTCCCAATCTCCTTTCCTCATTCGTCGACACCTTCGTTGACTTCTCAGTCAGCGGCGGTCTCTTCCTCCTCCCANCTCCTCCGCCGCCTCCTCCGCNAACCCANCTGCCTCCGCCTCGCCGCCTGATCGCAATNGGCGACCTCCACGGCGACCTCGAGAGGTCGAAGCAGGCGCTACGCCTCGCCGGACTGATCGACTCCTCCGACCGCTACGCCGGTGGATCCGCCACCGTCGTCCAGATCGGCGACGTCCTCGACCGCGGCGGCGACGAGCTCAGGATCCTCTACTTCCTCGAGAAGCTTAGGCGCGAAGCNGCACGGTGCGGCGGCAGAATCATCACCATGAACGGGAACCACGAGATCATGAACGTNGACGGCGATTTCCGTTACGTGACGGAGGCCGGCGTAGAAGAATTTAGGGTTTGGTTGGAATGGTTCCGAATGGGGAACAAGATGAAAAGTCTCTGCCAAGGCTCGGAGTCGGAACCACTAAGAGACCCCTTGGAAGGTGTCCACGTGGCGTTTAGAGGCGTGAGGGAGGAGTTCCGTGATGGGCTTCGGGCTAGGGTTGCGGCGTTGAGGCCCANCGGCCCAATTTCGAGAAGGTTCCTGGCCCACAACACCACCGTGTTGGTAGTTGGCGACTCGGTTTTCGTCCACGGCGGGTTGTTGCCGCAACACGTTTCCTACGGGCTTGAGAGGATCAACGAGGAGGTTAGGGATTGGGTTAACGGTTCCGCGGGCAGGGTTTCTCCGGCGTACTGCCGGGGGAGGAATGCGGTGGTTTGGCTGAGGAAATTCTCCGACGAGGTCGCGCAGAATTGTGACTGTTCGACCCTNGAGCATGTTCTGTCCACGGTTCCCGGTGTTAAGAGAATGGTGATGGGGCATACTATTCAGGCNGTTGGGATTAANGGCGTTTGCGACAACCGGGCNATTCGGATCGATGTTGGNATGTCCAAGGGGTGTGGTGGTGGTTTGCCTGAGGTTTTGGAGATTGATGGGACTTCTGGGCCGCGNATATTGACGTCGAATCCCTTGTATCGGAATAAGAAGGGAAGTATCGATGTTGGGAAGGAGGAAGAAGGGCTTGGATTGTTGCTNAAGGAACAAGGTAGACCTAGGCAGGTGGAAGTTAAGGCTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00076	302143	303336	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016787 hydrolase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000076s00018615.1	PF00149.23	Metallophos	58	164	1.30E-05

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	18.676
SRR1783600	control	18.494
SRR1783602	moderate drought stress	12.885
SRR1811619	moderate drought stress	12.595

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	14.154
DRR006520	Root Summer glycyrrhizin high producing strain	14.237
DRR006521	Root Winter glycyrrhizin high producing strain	6.104
DRR006522	Root Winter glycyrrhizin high producing strain	6.334
DRR006523	Root Summer glycyrrhizin low producing strain	19.318
DRR006524	Root Summer glycyrrhizin low producing strain	19.869
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.724
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.596

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.865
SRR2868004	Drought Stress (root)	22.706
SRR2967015	Control (root)	23.872

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.226
SRR9715740	Leaf	15.476
SRR9715741	Leaf	15.684
SRR9715739	Root	52.549
SRR9715742	Root	44.878
SRR9715743	Root	46.666

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.173
SRR8749028	MeJA induced 9h	11.687
SRR8749029	MeJA induced 9h	11.983
SRR8749030	Uninduced	7.105
SRR8749031	Uninduced	4.334
SRR8749032	Uninduced	8.901

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.318
SRR8400027	Control - Root	20.167