Gene detail

Gene detail information of Glyur000076s00018612

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G07190.1	3.00E-50	B-cell receptor-associated protein 31-like
NR	XP_003552124.1	2.08E-132	PREDICTED: B-cell receptor-associated protein 31-like [Glycine max]
trEMBL	tr\|K7MSR4\|K7MSR4_SOYBN	8.00E-133	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G35976.1}

Sequence

Transcript Sequence

>Glyur000076s00018612.1
CTTAATAAAAAGTGTACTCTCTGCTTTTAGGATCCGCATCCCTGTCATACGAAGCGGTGTTGTTGTTGACAAAAGTTNACTCCTTTTCTCTCTCACTCTCACTCTGTCTTTTTTCTCATCTCAATTTCCTTGTTGGAACCTTCATACCTACCACTCTAATCTCAAACCCATAAACACTTCCATTTAATTTTCACTTCCACCACCACAAGTCACTTAAAACTTAAAAAGGGTTTAAAGGTCTCTCTTCCTTCCCAAAGTTTCTCTCTTTCTACTTCACTCATCCCTTCTTAATCAGCATTAGTTCTTCAATGCTTAGGTCTCAGGTCTTGCAAATTGGAATTTTGAGCTTAATGCATGTAAAAGACTCAAACTTTCATGCTGGATATCGGTTTCTCGTTTGATTAGTCAAGTGGGTGATTTTGTGCTTGTCTCAGTTTCTGCAAAACGATCTGTCTGAGTGTGATATGCGAGGAGTGTTCTTCTTTCTATTAAGTTCAATTCAAGAGTAGCTTTGTGTACTTTTCTTCCTGAAGAATGGATTTGCTTGTGGGGTGGATTTTTTCATTTCTTGCTTGAAAGTGACAAAACAAAACCCCGTTTGGCAAAAGTAAGGATTTTTGGNAATTACAGTGAAGTGGGCATTCCTTGTTTAAGGAAGAGAAATAGGAAGGGTTTTTGGCAATTACAGTGAAGTGGGCATTTTAAGGAAGAAAGAAAAAGGATGATCCAGTTGTTGTTCTTAGTGCTTTTTGCTGAGGGTGTTCTGGCATTCCTTTTGTTGGTGAAGATAGGGCCATTGAGAGATCTTGTGATGAAGAGCCTGGATCAGCTCAAGATGGGGAAGGGTCCAGCTACAGTGAAAACTATTGCTGGCACAATGTCTGTGATTCTCCTTTCAAGCCTCATGAGCATTGTTAAGATCCAGAACAAAGGTGCTAAGCTTGGTACCATGTCACCCATGGATCAAGTTCTGTGGAGAACTCACTTGCTAGAGGCTTCACTCATTGGTTTTACATTATTCCTTGGATTCCTAATCGATCGAATGCACCATTATCTCCAGAAACTTGTCAATTTAAGGNGCAATATGGGAGCTTCAAAAGGAGAACTGGAAAACCTTAAAAAGGAGACTGTCCAGCTTAAAGAGAAGGAAGAGAAAGCTTCTGAGGAGATGAAACGGCTGAAGGAAGAACTCTCAACTCTGTCGGAAAGTTTGAAAAAGGTAAAGTTGGAATGTGAAGAGAAGGACAAGAGAGTCGAGACTGCCGAAGCTCATGTTGCTTCTCTCCAAAAACAAGCTGCAGATCTGCTACTTGAATATGACAGGCTCTTGGAAGACAACCAAAATCTTCAGACTCAAGCACGGGTACGGAACTATAGTATACTTGTTCAAATGGATTTTTCTCACTTTAGAGGTATAAATATCGAGGAGAAAACCTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00076	238225	288676	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006886 intracellular protein transport

cellular_component

GO:0005783 endoplasmic reticulum

GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000076s00018612.1	PF05529.7	Bap31	2	176	6.80E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.360
SRR1783600	control	4.427
SRR1783602	moderate drought stress	2.879
SRR1811619	moderate drought stress	2.846

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.668
DRR006520	Root Summer glycyrrhizin high producing strain	9.461
DRR006521	Root Winter glycyrrhizin high producing strain	2.888
DRR006522	Root Winter glycyrrhizin high producing strain	2.364
DRR006523	Root Summer glycyrrhizin low producing strain	7.235
DRR006524	Root Summer glycyrrhizin low producing strain	6.606
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.403
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.437

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.995
SRR2868004	Drought Stress (root)	5.515
SRR2967015	Control (root)	6.158

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.434
SRR9715740	Leaf	2.753
SRR9715741	Leaf	2.134
SRR9715739	Root	1.794
SRR9715742	Root	6.551
SRR9715743	Root	5.607

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.148
SRR8749028	MeJA induced 9h	2.390
SRR8749029	MeJA induced 9h	2.049
SRR8749030	Uninduced	0.572
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.225

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.187
SRR8400027	Control - Root	8.321