Gene detail information of Glyur000076s00018592 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G26840.1 | 3.00E-24 | small ubiquitin-like modifier 1 |
| NR | NP_001235592.1 | 3.40E-38 | uncharacterized protein LOC100305708 [Glycine max] |
| Swissprot | tr|P55852|SUMO1_ARATH | 1.00E-33 | Small ubiquitin-related modifier 1 |
| trEMBL | tr|C6SWA7|C6SWA7_SOYBN | 1.00E-38 | Small ubiquitin-related modifier {ECO:0000256|RuleBase:RU361190} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00076 | 80112 | 87023 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000076s00018592.1 | PF11976.3 | Rad60-SLD | 23 | 85 | 1.40E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.067 |
| SRR1783600 | control | 0.086 |
| SRR1783602 | moderate drought stress | 0.112 |
| SRR1811619 | moderate drought stress | 0.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.583 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.584 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.881 |
| SRR2868004 | Drought Stress (root) | 3.107 |
| SRR2967015 | Control (root) | 1.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.726 |
| SRR9715740 | Leaf | 0.245 |
| SRR9715741 | Leaf | 1.457 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.320 |
| SRR9715743 | Root | 0.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.141 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.345 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.939 |
| SRR8400027 | Control - Root | 0.093 |