Gene detail information of Glyur000075s00007206 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56290.1 | 5.00E-19 | peroxin 5 |
| NR | AES68523.2 | 9.47E-23 | peroxisomal targeting signal 1 receptor [Medicago truncatula] |
| Swissprot | tr|Q9FMA3|PEX5_ARATH | 3.00E-21 | Peroxisome biogenesis protein 5 |
| trEMBL | tr|G7J0B8|G7J0B8_MEDTR | 4.00E-23 | Peroxisomal targeting signal 1 receptor {ECO:0000313|EMBL:AES68523.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00075 | 387214 | 389286 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.183 |
| SRR1783600 | control | 1.449 |
| SRR1783602 | moderate drought stress | 2.998 |
| SRR1811619 | moderate drought stress | 2.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.307 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.810 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.735 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.858 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.911 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.972 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.558 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.363 |
| SRR2868004 | Drought Stress (root) | 4.500 |
| SRR2967015 | Control (root) | 5.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.614 |
| SRR9715740 | Leaf | 2.061 |
| SRR9715741 | Leaf | 4.022 |
| SRR9715739 | Root | 2.197 |
| SRR9715742 | Root | 3.858 |
| SRR9715743 | Root | 4.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.081 |
| SRR8749028 | MeJA induced 9h | 2.266 |
| SRR8749029 | MeJA induced 9h | 2.096 |
| SRR8749030 | Uninduced | 0.076 |
| SRR8749031 | Uninduced | 0.097 |
| SRR8749032 | Uninduced | 0.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.120 |
| SRR8400027 | Control - Root | 3.649 |