Gene detail information of Glyur000075s00007205 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G15530.4 | 1.00E-07 | RING/U-box superfamily protein |
| NR | XP_007161613.1 | 2.69E-19 | hypothetical protein PHAVU_001G084100g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7CTU4|V7CTU4_PHAVU | 1.00E-19 | Uncharacterized protein {ECO:0000313|EMBL:ESW33607.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00075 | 385092 | 386643 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.009 |
| SRR1783600 | control | 2.756 |
| SRR1783602 | moderate drought stress | 8.974 |
| SRR1811619 | moderate drought stress | 9.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.096 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.358 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.356 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.313 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.443 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.417 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.145 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.649 |
| SRR2868004 | Drought Stress (root) | 1.654 |
| SRR2967015 | Control (root) | 1.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.741 |
| SRR9715740 | Leaf | 0.592 |
| SRR9715741 | Leaf | 0.495 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.753 |
| SRR8749028 | MeJA induced 9h | 2.319 |
| SRR8749029 | MeJA induced 9h | 1.425 |
| SRR8749030 | Uninduced | 0.597 |
| SRR8749031 | Uninduced | 0.569 |
| SRR8749032 | Uninduced | 0.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.331 |
| SRR8400027 | Control - Root | 0.267 |