Gene detail information of Glyur000075s00007204 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36650.1 | 2.00E-32 | |
| NR | XP_007162826.1 | 0 | hypothetical protein PHAVU_001G184200g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LI74|CHUP1_ARATH | 6.00E-22 | Protein CHUP1, chloroplastic |
| trEMBL | tr|V7CZX2|V7CZX2_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW34820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00075 | 382143 | 383943 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.679 |
| SRR1783600 | control | 0.710 |
| SRR1783602 | moderate drought stress | 0.679 |
| SRR1811619 | moderate drought stress | 0.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.283 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.330 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.212 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.208 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.286 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.215 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.631 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.136 |
| SRR2868004 | Drought Stress (root) | 4.816 |
| SRR2967015 | Control (root) | 4.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.476 |
| SRR9715740 | Leaf | 3.655 |
| SRR9715741 | Leaf | 3.701 |
| SRR9715739 | Root | 0.029 |
| SRR9715742 | Root | 1.611 |
| SRR9715743 | Root | 0.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.023 |
| SRR8749028 | MeJA induced 9h | 0.043 |
| SRR8749029 | MeJA induced 9h | 0.117 |
| SRR8749030 | Uninduced | 0.084 |
| SRR8749031 | Uninduced | 0.340 |
| SRR8749032 | Uninduced | 0.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.723 |
| SRR8400027 | Control - Root | 2.207 |