Gene detail

Gene detail information of Glyur000075s00007200.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G03795.1	9.00E-148	Exostosin family protein
NR	XP_003553575.1	0	PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max]
COG	YP_677520.1	4.00E-06	hypothetical protein CHU_0899 [Cytophaga hutchinsonii ATCC 33406]
Swissprot	tr\|Q9FFN2\|GLYT3_ARATH	0	Probable glycosyltransferase At5g03795
trEMBL	tr\|I1NAG9\|I1NAG9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G37340.1}

Sequence

Transcript Sequence

>Glyur000075s00007200.1
ATGAGTAGTTGTAAGAGGAGTGGTTGTTTTGCATGGTGGGGTTCAGAGTCATATTCATCTTCATCCATGAAGCTCTTGTTGTTTATGGTGCCCCTAATAATGGTAGCAGGGCTTGTTTCTGTATTGGGTCCTAACCCCTCAGGTTGGGCTCTTATTCAAAGCCCACCTCTGTTATGGACCTCTGTTACTTCCTCTAACGGTGGTGCTGTGACAACAACCACTATGGAGGCTTCAGCTGTTTCATCAAAGAGAGAAGGTTCTGAAGGGCTAGTTGTTGTGGCTGTTGATTTTCACAANAAGGAGGAGAAAGCTATTATCTCTGATGACTCTGCCTTCAATCACTCCTTTACTCCCCCACTTTCCATTCAGGCCATTCAACAATCTGCTAACAAAGATGAAGAAAGTCTCAATGGGTCCCAAATTTGGCCCAACACGGCTCCTGTGAACGAATCTCATGTTCCTCTAGAGAGACCAAAGCNGCCAAGAAAGTTCAGCATCTTAGACAGAACCGAAGCTGGTCTACTACAAGCCCGAGCCGCAATAAGAGAAGCAAGAAATGGAAATCAAACACAAGATACAGACTACGTTCCAGTAGGACCAATGTATCATAATGCTAACGCATTTCACAGGAGTTACTTAGAAATGGAGAAACAGTTCAAAGTGTTCGTGTACGAGGAAGGGGAGCCTCCGGTTTTCCACAATGGNCCTTGCAAAAGCATATACTCCATGGAAGGGAATTTCATCCATGCCATTGAGATGAATGACCAATTCCGAACTANAGATCCCGAGAAGGCACATGTATTCTTCCTTCCTTTTAGTGTAGCCATGATGGTCCAATTCGTCTATGTACGTGACTCTCATGATTTTGGCCCCATCAAGAAAACTGTCACGGATTATGTCGATGGGCCNGAGGCTTCGCGTTCTGTTCCTAACCTGGACAAGAATTCGATTCGTGTGCTATGCAATGCTAACACTTCTGAGGGGTTCAAGCCTGCAAAGGATGTGTCTTTCCCAGAGATCAATCTCCAAACCGGTTCAATAAAAGGTTTCATTGGTGGGCCATCACCATCTAGGCGTTCNGTATTGGCTTTCTTTGCCGGTGGGCTTCACGGGCCCATTAGGCCCGTTCTTCTTGAGCACTGGGAGAANAAGGATGAAGACATTCAGGTTCACNAGTACCTTCCAAAGGGTGTGTCCTACTATGAGATGCTGAGGAAGAGCAAGTTCTGCCTCTGCCCCAGTGGGTATGAGGTTGCAAGCCCAAGAGTGGTGGAGGCAATTTACACGGGGTGTGTCCCAGTCCTCATTTCGGATCACTATGTCCCTCCGTTCAGTGATGTCTTGAATTGGAAATCGTTCTCCGTTGAGGTTTCAGTGAAGGACATACCCAANTTGAAGAGGATTCTGTTGAGTATTTCTCCGAGGCAGTATATAAGGATGCAGAGAAGAGTAGGACTTGTTAGGAGACACTTTGAGGTGCATTCTCCACCCAAGAGATTCGATGTGTTCCATATGATCCTTCATTCTGTGTGGCTTAGAAGATTGAACTTCAGAGTCCACCATGATCAATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00075	357197	360305	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT47

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000075s00007200.1	PF03016.10	Exostosin	216	278	7.90E-07
Glyur000075s00007200.1	PF03016.10	Exostosin	303	472	1.10E-38

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.509
SRR1783600	control	2.582
SRR1783602	moderate drought stress	4.600
SRR1811619	moderate drought stress	4.414

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.343
DRR006522	Root Winter glycyrrhizin high producing strain	0.201
DRR006523	Root Summer glycyrrhizin low producing strain	0.307
DRR006524	Root Summer glycyrrhizin low producing strain	0.352
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.176
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.165

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	10.503
SRR2868004	Drought Stress (root)	9.267
SRR2967015	Control (root)	7.679

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.466
SRR9715740	Leaf	0.081
SRR9715741	Leaf	0.519
SRR9715739	Root	2.594
SRR9715742	Root	1.503
SRR9715743	Root	1.477

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.772
SRR8749028	MeJA induced 9h	24.698
SRR8749029	MeJA induced 9h	37.392
SRR8749030	Uninduced	12.400
SRR8749031	Uninduced	49.582
SRR8749032	Uninduced	37.311

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.226
SRR8400027	Control - Root	7.963