Gene detail information of Glyur000075s00007189 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04550.1 | 2.00E-95 | Protein of unknown function (DUF668) |
| NR | KHN18721.1 | 0 | hypothetical protein glysoja_021472 [Glycine soja] |
| trEMBL | tr|K7KFX7|K7KFX7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G34770.9} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00075 | 296610 | 298319 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000075s00007189.1 | PF11961.3 | DUF3475 | 31 | 87 | 6.70E-17 |
| Glyur000075s00007189.1 | PF05003.7 | DUF668 | 397 | 488 | 9.30E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.406 |
| SRR1783600 | control | 6.362 |
| SRR1783602 | moderate drought stress | 9.623 |
| SRR1811619 | moderate drought stress | 9.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.028 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.341 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.987 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.864 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.517 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.585 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.231 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.298 |
| SRR2868004 | Drought Stress (root) | 13.806 |
| SRR2967015 | Control (root) | 20.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.355 |
| SRR9715740 | Leaf | 4.528 |
| SRR9715741 | Leaf | 3.594 |
| SRR9715739 | Root | 3.763 |
| SRR9715742 | Root | 6.044 |
| SRR9715743 | Root | 6.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.670 |
| SRR8749028 | MeJA induced 9h | 6.224 |
| SRR8749029 | MeJA induced 9h | 5.532 |
| SRR8749030 | Uninduced | 1.861 |
| SRR8749031 | Uninduced | 1.465 |
| SRR8749032 | Uninduced | 1.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.146 |
| SRR8400027 | Control - Root | 12.022 |