Gene detail information of Glyur000075s00007168 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42880.1 | 1.00E-06 | MAP kinase 20 |
| NR | CBI27363.3 | 2.89E-07 | unnamed protein product [Vitis vinifera] |
| Swissprot | tr|Q5VN19|MPK11_ORYSJ | 2.00E-07 | Mitogen-activated protein kinase 11 |
| trEMBL | tr|F6HFX5|F6HFX5_VITVI | 1.00E-07 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB51127.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00075 | 156942 | 159351 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.738 |
| SRR1783600 | control | 10.030 |
| SRR1783602 | moderate drought stress | 17.244 |
| SRR1811619 | moderate drought stress | 18.352 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.952 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.953 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.664 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.845 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.689 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.699 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.996 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.193 |
| SRR2868004 | Drought Stress (root) | 22.749 |
| SRR2967015 | Control (root) | 21.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.789 |
| SRR9715740 | Leaf | 8.387 |
| SRR9715741 | Leaf | 12.099 |
| SRR9715739 | Root | 1.873 |
| SRR9715742 | Root | 5.370 |
| SRR9715743 | Root | 4.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.040 |
| SRR8749028 | MeJA induced 9h | 9.555 |
| SRR8749029 | MeJA induced 9h | 7.741 |
| SRR8749030 | Uninduced | 10.903 |
| SRR8749031 | Uninduced | 12.344 |
| SRR8749032 | Uninduced | 12.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.548 |
| SRR8400027 | Control - Root | 28.786 |