Gene detail

Gene detail information of Glyur000075s00007153

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G36380.1	2.00E-97	pleiotropic drug resistance 6
NR	KEH24129.1	8.17E-127	drug resistance transporter-like ABC domain protein [Medicago truncatula]
COG	NP_682119.1	5.00E-10	ABC transporter ATP-binding protein [Thermosynechococcus elongatus BP-1]
Swissprot	tr\|Q7PC87\|AB34G_ARATH	7.00E-105	ABC transporter G family member 34
trEMBL	tr\|A0A072U346\|A0A072U346_MEDTR	3.00E-127	Drug resistance transporter-like ABC domain protein {ECO:0000313\|EMBL:KEH24129.1}

Sequence

Transcript Sequence

>Glyur000075s00007153.1
ATGGCGGCATCGGTATTGGCGGGGGATGATTTGGCGACATCAACGAGCAGTCGTCGGAGCTGGACGTCGACGAGTTTCCGGGAAGTGTGGACGGCGGCGCCGCCGGACGTGTTCGAGCGGAGTGACCGGCACACTCAGGAGGATGACGAGTACCACCTCACTTGGGCCGCCATCGAGCGCTTGCCCACTTTCGAGCGCATGAGAAAAGGTGTCGTGAAGCACGTGCTCGACACTGGAAAGGTCGTGCATGATGAAGTTGATGTTGCCAAACTTGGCTTACATGACAAGAAGCTCTTGGTGGGGATTGAAATTCCGAAAATTGAAGTCCGGTATGAGAATTTATCAGTGGAGGGAGATGTGNATGTTGGGAGCAGAGCGCTTCCTACTTTGCTTAATGCTACTTTCAACACTTTGGAGAGTGTTCTCGGATTGTTTCGCCTTGCACCCTCCAAGAAGAGAGAAATTCAGATTCTCAAAGATGTCAGTGGAATGGTGAAACCATCAAGGATGACTCTCCTTCTCGGTCCTCCAGGTGCTGGAAAAACAACATTGCTTCTGGCACTTGCAGGAAAACTTGATCGCGATTTAAAGGCTTCTGGAAAAATCACTTACTGTGGCCATGAGCTAAATGAATTCATTGCTCGAAAAACTTGTACCTATATTAGTCAGCATGACATTCACTATGGGGAAATGACAGTGAGAGAGACATTAGATTTCTCATCACGTTGCCTAGAACTATCCATGACTGTTTCTAGGCTTCCTGTCTTCTACAAACAAAGGGATTTCATGTTCTACCCTGCATGGGCTTTTGGGTTACCTATATGGATTCTTAGGATCCCTCTCTCCCTTATGGAATCAGGGATATGGATTATCCTTACATATTATACAATTGGGTTTGCTCCTGCTGCTAACAGTTTACTTTTATCAACTTCACTGCGGATGAAGGTGACAAGAAGAATGAAAATTCATCCTCTAGACACGATATTCTTGAAGGAAATGAGGAGTCACGGAATCAATAACAATCGACTTAAACTACTACAAGACGTTAGTGGTGCTTTCAGACCAGGCATATTAACAGCACTTGTAGGTGTTAGTGGTGCTGGGAAGACTACCCTCATGGATGTATTAGCTGGAAGAAAAACAGGTGGATACATTGAAGGAAATATCAGCATCTCAGGTTATCCAAAGAACCAAGCAACATTCGCTCGAATCAGCGGTTACTGCGAACAGAATGACATTCATTCTCCACATGTTACTGTCTATGAATCACTATTGTTTTCAGCATGGCTTCGTCTTCCTTCAGATGTAAAGACAGAAACACGAAAGGCTATCCCAGGGGTTCCAAAAATCAAGGATGGTTATAATCCGGCCACATGGATGCTTGAGATCAGCTCTCCTTCAATTGAGACTCAACTGGATGTGGCAATAGAGGCAATTTATAATGCAATTCAAACAGCCATATACACTTTAATCCTTTACTCCATGATGGGGTTCGAATGGAAGGCAACGAACTTCTTATGGTTCTACTACTATATACTAATGAGTTTTATGTACTTCACATTGTATGGGATGATGCTTGTTGCACTAACACCGGGACACCAAGTTGCTGCCATTTGTATGTCCTTCTTCTTTAGTTTCTGGAACTTGTTCTCTGGCTTTATCATTCCAAGGATGCAAATTCCTGTATGGTGGAGATGGTACTATTGGGCTTCTCCTGTTGCTTGGACACTGTATGGCCTTATAACCTCACAACTGGGTGACAAAAATGTAGAATTGGAGATACCAGGAGCTGGAAGCATGGGACTTAAGGAATTCCTTAAACAAAATTGGGGTTATGACTATGACCTCCTTCCGGCGGTTGCTGCTGCTCATGTAGGCTGGGTTCTCCTCTTTGTGTTCAATGATTTTGCCACTCGAAGGAGAAATCACCGAAGTTGGCCCTCGATGAATTTTAGTGCAGTGTGGGCACCACCTCCAAACGTGTTCGACATAAGGAGTGAGTGTGCCCAAGAGGATAATGAGGAGGACCTTAAATGGGCCGCGATCGAACGCTTGCCTACGTTCGATCGCATGAGAAAAGGGGTGTTGAAACTAGCACTTGATAATGGAAAGATTGTGCATTGCCCAATTGATGTTACCAATCTTGGGTTGCAAGAAAAAAAGCTACTACTAGAGAGTATGCTAAAGTTTGTGGAGGAAGATAATGAGAAATTCTTACGTGGACTCAGAGATAGAGTTAATAGGGTGGGGATTGAAGTTCCAAAAATAGAAGTACGGTACGAGAATGTGTCAGTGGAGGGAGATGTGCATGTTGGAAAGAGATCACTTCCTACCCTACTTAATGTTACTCTTAACACTTTTGAGAATATTGTGGGATTGTTTCACCTTGCACCTTCCAACAAGAGAAATATTCGAATTCTTAAAGACGTTAGCGGAATCATCAAACCATCAAGGATGACCCTACTTCTGGGTCCTCCAAGTGCAGGGAAAACAACATTGCTTTTAGCACTTACAGGGAATCTTGATCAGAATTTAAGGGCTTCTGGAAGAATCACTTATTGTGGCCATGAACTAAATGAATTTGTTGCTAGAAAAACGTGTGCCTATATTAGTCAACATGACCTTCATTATGGACAAATGACGGTGAGAGAGANATTGGATTTCTCAGGACGTTGTCTAGGTGTTGGCACTAGATATGAAATATTTTTCCTACAATTCTTGGCATTATTTAGTGTTCATCATATGGCTCTCGCTCTGTTTCGACTTGTTGGTTCAATTGCTAGAACACGAGTTGTAGCAAACATATTGAGTAGTATGACCTTTCAAATTGTGTATGTTCTAGGAGGATTTATTGTTGCCAAAGCTTTCGGCGATTCAAAAGCATTCCTCAGGGACGAAGATAACAAGAAAAATGAAAAGTCAACCTCTACACGACATATACTCGAAGAACGAAGAACAGGAATGGTCCTACCNTTTCAACCTCTTTCGCTTGCATTCAGTTGTGTGAGCTACTATGTGGATATGCCCGCTGAAATGAAGAGTCAAGGAGTCAATGAAGATCGACTTCAACTATTGCATGATGTTAGTGGTGCTTTCAGACCAGGCATATTGACAGCACTTATGGGTGTTAGTGGTGCTGGAAAGACAACCTTAATGGATGTATTAGCAGGAAGAAAAACAGGTGGGTACATTGAAGGAAGTATTAGCATCTCAGGGTACCCAAAGAACCAAGCAACATTTGCTCGAGTCAGTGGTTACTGTGAACAAAATGACATTCATTCTCCCCATGTTACCGTCTATGAATCATTGCTATTTTCAGCGTGGCTTCGCCTTCCTTCAGACATAAAGACACAAAAACGAAAGAAGGAATCAAGAGCTTATCAAAGATCTAAGCACTCCAACACCAAGTTCCAAGGACTTATCCTTCCCTACCAAATATTCCCAATCCTTTTTTGTACAGTGGAAAGCTTGTTTCTGGAAACAATATTGGTGGCAGTAGAGGTGATTTATAACATAATTCAAACGGCCATTTACACTCTCATCATTTTTTCCATGATGGGGTTTGAATGGAAGGATGGGAAATTTTTCTCATTGTACTATTATATGTTGATGTGTTTAATCTACTACACATTGTTTGGGATGATGNTCATTTCATTAACACCGAGTTACCATATTGCTTGTATTTTTGGTCCCTTCTTTATGAACACCTGGAACTTGTTCGCCGGCTTTGTCATTCCCAGGATGAAAATCCCTATATGGTGGAGATGGTATTATTGGGTTTCACCTAATGCTTGGACACTCTATGGCCTTGTTACCTCTCAACTGGGTGACAAAATTGCACAAATAGAAATTCCAGGAGGTGGAAGCATGGAGCTTAAGGAATTCCTCAAGGAAAGTTTTGGTTTTGAACATGACTTCCTTCCTGTGGTTGCTGCTGCTCATGTGGGCTGGGTTCTTCTTTTCTTGTTTGTGTTTGCTTGTGGCATGAAATTTCTAAACTTCCAAAAAAGATAGGTAGGGTTCCTCTTTTTTTTTT

Protein Sequence

>Glyur000075s00007153.1
MAASVLAGDDLATSTSSRRSWTSTSFREVWTAAPPDVFERSDRHTQEDDEYHLTWAAIERLPTFERMRKGVVKHVLDTGKVVHDEVDVAKLGLHDKKLLVGIEIPKIEVRYENLSVEGDVXVGSRALPTLLNATFNTLESVLGLFRLAPSKKREIQILKDVSGMVKPSRMTLLLGPPGAGKTTLLLALAGKLDRDLKASGKITYCGHELNEFIARKTCTYISQHDIHYGEMTVRETLDFSSRCLELSMTVSRLPVFYKQRDFMFYPAWAFGLPIWILRIPLSLMESGIWIILTYYTIGFAPAANSLLLSTSLRMKVTRRMKIHPLDTIFLKEMRSHGINNNRLKLLQDVSGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGNISISGYPKNQATFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVKTETRKAIPGVPKIKDGYNPATWMLEISSPSIETQLDVAIEAIYNAIQTAIYTLILYSMMGFEWKATNFLWFYYYILMSFMYFTLYGMMLVALTPGHQVAAICMSFFFSFWNLFSGFIIPRMQIPVWWRWYYWASPVAWTLYGLITSQLGDKNVELEIPGAGSMGLKEFLKQNWGYDYDLLPAVAAAHVGWVLLFVFNDFATRRRNHRSWPSMNFSAVWAPPPNVFDIRSECAQEDNEEDLKWAAIERLPTFDRMRKGVLKLALDNGKIVHCPIDVTNLGLQEKKLLLESMLKFVEEDNEKFLRGLRDRVNRVGIEVPKIEVRYENVSVEGDVHVGKRSLPTLLNVTLNTFENIVGLFHLAPSNKRNIRILKDVSGIIKPSRMTLLLGPPSAGKTTLLLALTGNLDQNLRASGRITYCGHELNEFVARKTCAYISQHDLHYGQMTVREXLDFSGRCLGVGTRYEIFFLQFLALFSVHHMALALFRLVGSIARTRVVANILSSMTFQIVYVLGGFIVAKAFGDSKAFLRDEDNKKNEKSTSTRHILEERRTGMVLPFQPLSLAFSCVSYYVDMPAEMKSQGVNEDRLQLLHDVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFARVSGYCEQNDIHSPHVTVYESLLFSAWLRLPSDIKTQKRKKESRAYQRSKHSNTKFQGLILPYQIFPILFCTVESLFLETILVAVEVIYNIIQTAIYTLIIFSMMGFEWKDGKFFSLYYYMLMCLIYYTLFGMMXISLTPSYHIACIFGPFFMNTWNLFAGFVIPRMKIPIWWRWYYWVSPNAWTLYGLVTSQLGDKIAQIEIPGGGSMELKEFLKESFGFEHDFLPVVAAAHVGWVLLFLFVFACGMKFLNFQKR

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00075	38609	73460	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016020 membrane

molecular_function

GO:0005524 ATP binding

GO:0016887 ATPase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000075s00007153.1	PF14510.1	ABC_trans_N	100	135	5.20E-08
Glyur000075s00007153.1	PF00005.22	ABC_tran	158	245	6.30E-10
Glyur000075s00007153.1	PF00005.22	ABC_tran	346	438	6.50E-09
Glyur000075s00007153.1	PF01061.19	ABC2_membrane	474	584	1.40E-23
Glyur000075s00007153.1	PF14510.1	ABC_trans_N	713	785	3.60E-14
Glyur000075s00007153.1	PF00005.22	ABC_tran	807	905	2.40E-08
Glyur000075s00007153.1	PF00005.22	ABC_tran	1025	1127	3.20E-09
Glyur000075s00007153.1	PF01061.19	ABC2_membrane	1164	1274	4.80E-21
Glyur000075s00007153.2	PF14510.1	ABC_trans_N	100	135	4.10E-08
Glyur000075s00007153.2	PF00005.22	ABC_tran	158	245	4.80E-10
Glyur000075s00007153.2	PF00005.22	ABC_tran	346	438	4.90E-09
Glyur000075s00007153.2	PF01061.19	ABC2_membrane	474	584	1.10E-23
Glyur000075s00007153.2	PF14510.1	ABC_trans_N	713	785	2.70E-14
Glyur000075s00007153.2	PF00005.22	ABC_tran	807	914	1.50E-08
Glyur000075s00007153.2	PF00005.22	ABC_tran	986	1063	1.70E-08
Glyur000075s00007153.3	PF08216.6	CTNNBL	31	69	1.30E-10
Glyur000075s00007153.3	PF01061.19	ABC2_membrane	111	233	6.30E-17
Glyur000075s00007153.3	PF00005.22	ABC_tran	305	407	1.10E-09
Glyur000075s00007153.3	PF01061.19	ABC2_membrane	444	554	1.60E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.820
SRR1783600	control	3.119
SRR1783602	moderate drought stress	6.126
SRR1811619	moderate drought stress	6.442

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.609
DRR006520	Root Summer glycyrrhizin high producing strain	3.448
DRR006521	Root Winter glycyrrhizin high producing strain	2.055
DRR006522	Root Winter glycyrrhizin high producing strain	2.108
DRR006523	Root Summer glycyrrhizin low producing strain	3.445
DRR006524	Root Summer glycyrrhizin low producing strain	3.446
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.691
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.813

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.727
SRR2868004	Drought Stress (root)	16.267
SRR2967015	Control (root)	13.826

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.083
SRR9715740	Leaf	1.783
SRR9715741	Leaf	2.188
SRR9715739	Root	0.172
SRR9715742	Root	1.360
SRR9715743	Root	1.070

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.587
SRR8749028	MeJA induced 9h	1.141
SRR8749029	MeJA induced 9h	0.401
SRR8749030	Uninduced	1.164
SRR8749031	Uninduced	0.945
SRR8749032	Uninduced	0.512

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.011
SRR8400027	Control - Root	7.562