Gene detail information of Glyur000074s00005587 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18215.1 | 2.00E-73 | Protein of unknown function, DUF599 |
| NR | AFK49129.1 | 3.58E-141 | unknown [Lotus japonicus] |
| COG | YP_004371043.1 | 6.00E-29 | hypothetical protein Desac_2033 [Desulfobacca acetoxidans DSM 11109] |
| trEMBL | tr|I3T9D7|I3T9D7_LOTJA | 1.00E-141 | Uncharacterized protein {ECO:0000313|EMBL:AFK49129.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00074 | 386960 | 389700 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000074s00005587.1 | PF04654.7 | DUF599 | 8 | 212 | 5.40E-57 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.676 |
| SRR1783600 | control | 4.265 |
| SRR1783602 | moderate drought stress | 4.433 |
| SRR1811619 | moderate drought stress | 4.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.620 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.701 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.281 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.344 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.252 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.127 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.852 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.223 |
| SRR2868004 | Drought Stress (root) | 5.597 |
| SRR2967015 | Control (root) | 5.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.227 |
| SRR9715740 | Leaf | 4.011 |
| SRR9715741 | Leaf | 3.583 |
| SRR9715739 | Root | 0.293 |
| SRR9715742 | Root | 0.715 |
| SRR9715743 | Root | 0.940 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.712 |
| SRR8749028 | MeJA induced 9h | 16.416 |
| SRR8749029 | MeJA induced 9h | 15.629 |
| SRR8749030 | Uninduced | 30.415 |
| SRR8749031 | Uninduced | 15.236 |
| SRR8749032 | Uninduced | 12.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.857 |
| SRR8400027 | Control - Root | 3.650 |