Gene detail information of Glyur000074s00005586 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18215.1 | 9.00E-68 | Protein of unknown function, DUF599 |
| NR | XP_003530940.1 | 9.06E-158 | PREDICTED: uncharacterized protein LOC100775536 isoform X1 [Glycine max] |
| COG | YP_004371043.1 | 8.00E-32 | hypothetical protein Desac_2033 [Desulfobacca acetoxidans DSM 11109] |
| trEMBL | tr|K7L513|K7L513_SOYBN | 3.00E-158 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G05461.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00074 | 381368 | 384213 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000074s00005586.1 | PF04654.7 | DUF599 | 8 | 210 | 2.20E-57 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.066 |
| SRR1783600 | control | 8.073 |
| SRR1783602 | moderate drought stress | 23.469 |
| SRR1811619 | moderate drought stress | 23.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.560 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.164 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.295 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.323 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.627 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.641 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.729 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.032 |
| SRR2868004 | Drought Stress (root) | 22.903 |
| SRR2967015 | Control (root) | 19.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.855 |
| SRR9715740 | Leaf | 40.021 |
| SRR9715741 | Leaf | 30.301 |
| SRR9715739 | Root | 16.109 |
| SRR9715742 | Root | 9.976 |
| SRR9715743 | Root | 13.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.513 |
| SRR8749028 | MeJA induced 9h | 9.879 |
| SRR8749029 | MeJA induced 9h | 5.357 |
| SRR8749030 | Uninduced | 7.683 |
| SRR8749031 | Uninduced | 2.458 |
| SRR8749032 | Uninduced | 5.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.067 |
| SRR8400027 | Control - Root | 8.183 |