Gene detail information of Glyur000074s00005581 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18190.1 | 3.00E-05 | TCP-1/cpn60 chaperonin family protein |
| Swissprot | tr|Q9LV21|TCPD_ARATH | 8.00E-06 | T-complex protein 1 subunit delta {ECO:0000303|PubMed:11599560} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00074 | 352520 | 354248 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.473 |
| SRR1783600 | control | 12.832 |
| SRR1783602 | moderate drought stress | 18.910 |
| SRR1811619 | moderate drought stress | 18.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.502 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.309 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.001 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.054 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.921 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.413 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.973 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.892 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.015 |
| SRR2868004 | Drought Stress (root) | 9.190 |
| SRR2967015 | Control (root) | 9.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.501 |
| SRR9715740 | Leaf | 0.119 |
| SRR9715741 | Leaf | 1.005 |
| SRR9715739 | Root | 0.580 |
| SRR9715742 | Root | 0.369 |
| SRR9715743 | Root | 0.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.363 |
| SRR8749028 | MeJA induced 9h | 3.626 |
| SRR8749029 | MeJA induced 9h | 2.056 |
| SRR8749030 | Uninduced | 1.861 |
| SRR8749031 | Uninduced | 2.064 |
| SRR8749032 | Uninduced | 0.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.510 |
| SRR8400027 | Control - Root | 2.543 |