Gene detail information of Glyur000074s00005567 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G42550.1 | 5.00E-110 | plastid movement impaired1 |
| NR | XP_003631060.1 | 0 | hypothetical protein MTR_8g106680 [Medicago truncatula] |
| trEMBL | tr|G7LD87|G7LD87_MEDTR | 0 | Plastid movement impaired protein {ECO:0000313|EMBL:AET05536.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00074 | 288947 | 291643 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000074s00005567.1 | PF10358.4 | NT-C2 | 131 | 283 | 1.90E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.027 |
| SRR1811619 | moderate drought stress | 0.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.080 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.040 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.019 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 74.261 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 70.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.054 |
| SRR2967015 | Control (root) | 0.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.486 |
| SRR9715740 | Leaf | 59.504 |
| SRR9715741 | Leaf | 50.341 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.160 |
| SRR9715743 | Root | 0.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.036 |