Gene detail information of Glyur000074s00005566 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G18060.1 | 2.00E-82 | |
| NR | XP_003525204.1 | 3.17E-142 | PREDICTED: uncharacterized protein LOC100785302 isoform X1 [Glycine max] |
| trEMBL | tr|I1K5F3|I1K5F3_SOYBN | 1.00E-142 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G34130.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00074 | 285577 | 287713 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.055 |
| SRR1783600 | control | 4.058 |
| SRR1783602 | moderate drought stress | 3.830 |
| SRR1811619 | moderate drought stress | 3.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.177 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.134 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.028 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.878 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.221 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.420 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 43.506 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.675 |
| SRR2868004 | Drought Stress (root) | 6.132 |
| SRR2967015 | Control (root) | 5.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 38.438 |
| SRR9715740 | Leaf | 59.922 |
| SRR9715741 | Leaf | 34.581 |
| SRR9715739 | Root | 1.765 |
| SRR9715742 | Root | 1.730 |
| SRR9715743 | Root | 2.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.534 |
| SRR8749028 | MeJA induced 9h | 1.872 |
| SRR8749029 | MeJA induced 9h | 1.447 |
| SRR8749030 | Uninduced | 0.770 |
| SRR8749031 | Uninduced | 0.519 |
| SRR8749032 | Uninduced | 0.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.375 |
| SRR8400027 | Control - Root | 11.197 |