Gene detail information of Glyur000074s00005555 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18050.1 | 4.00E-86 | |
| NR | XP_004503298.1 | 0 | PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Cicer arietinum] |
| Swissprot | tr|Q9SUC9|UGPI7_ARATH | 2.00E-63 | Uncharacterized GPI-anchored protein At4g28100 (Precursor) |
| trEMBL | tr|Q1SN14|Q1SN14_MEDTR | 7.00E-171 | Transmembrane protein, putative {ECO:0000313|EMBL:AET05553.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00074 | 232912 | 235989 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 131.327 |
| SRR1783600 | control | 131.676 |
| SRR1783602 | moderate drought stress | 122.493 |
| SRR1811619 | moderate drought stress | 122.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 183.016 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 179.633 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.507 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.187 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 54.005 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 54.906 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.470 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.789 |
| SRR2868004 | Drought Stress (root) | 16.512 |
| SRR2967015 | Control (root) | 22.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.355 |
| SRR9715740 | Leaf | 3.088 |
| SRR9715741 | Leaf | 3.285 |
| SRR9715739 | Root | 61.729 |
| SRR9715742 | Root | 29.791 |
| SRR9715743 | Root | 31.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.708 |
| SRR8749028 | MeJA induced 9h | 0.387 |
| SRR8749029 | MeJA induced 9h | 0.868 |
| SRR8749030 | Uninduced | 0.035 |
| SRR8749031 | Uninduced | 0.127 |
| SRR8749032 | Uninduced | 0.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 80.625 |
| SRR8400027 | Control - Root | 85.552 |